Factsheet for TraesCS5D01G445100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G440700.1	Wheat	nucleus	95.4	94.05
TraesCS5A01G437900.1	Wheat	nucleus	93.1	93.64
EER93298	Sorghum	nucleus	73.85	75.81
HORVU5Hr1G105770.2	Barley	nucleus	94.54	63.15
Solyc06g053960.2.1	Tomato	nucleus	21.55	52.82
TraesCS2D01G087400.1	Wheat	nucleus	61.21	51.7
TraesCS4D01G276500.1	Wheat	nucleus	47.7	48.68
AT3G51910.1	Thale cress	nucleus	37.07	47.43
VIT_00s0179g00150.t01	Wine grape	nucleus	48.85	47.09
CDX95313	Canola	nucleus	35.92	46.64
TraesCS1D01G382900.1	Wheat	nucleus	48.56	46.43
Bra012829.1-P	Field mustard	nucleus	33.05	46.37
KRH32059	Soybean	nucleus	45.11	46.04
KRH31657	Soybean	nucleus	44.25	45.7
KRG95588	Soybean	nucleus	48.56	45.68
KRH67266	Soybean	nucleus	49.43	44.56
KRG91367	Soybean	nucleus	46.26	43.99
PGSC0003DMT400049793	Potato	nucleus	45.98	43.96
Bra012828.1-P	Field mustard	nucleus	33.62	43.49
CDX90626	Canola	nucleus	33.62	43.49
CDY29054	Canola	nucleus	33.05	43.4
Solyc09g065660.2.1	Tomato	nucleus	46.26	43.28
VIT_05s0020g04090.t01	Wine grape	nucleus	43.39	42.9
PGSC0003DMT400049795	Potato	nucleus	44.25	42.78
KRH35452	Soybean	nucleus	44.83	42.62
Solyc09g082670.2.1	Tomato	nucleus	43.1	42.13
TraesCS5D01G393200.1	Wheat	nucleus	45.4	41.91
CDX90627	Canola	nucleus	34.48	41.81
Zm00001d034433_P003	Maize	nucleus	74.43	41.71
PGSC0003DMT400016511	Potato	nucleus	43.1	41.44
PGSC0003DMT400041944	Potato	nucleus	40.23	40.7
CDY34229	Canola	nucleus	43.39	39.84
CDY14893	Canola	nucleus	29.89	39.69
CDY10674	Canola	nucleus	43.97	39.33
Bra035993.1-P	Field mustard	nucleus	31.61	39.15
AT5G43840.1	Thale cress	nucleus	31.32	38.65
CDY46606	Canola	nucleus	42.53	38.64
Bra007739.1-P	Field mustard	nucleus	31.61	38.6
CDY11470	Canola	nucleus	31.61	38.6
CDX94887	Canola	nucleus	29.89	38.52
AT3G22830.1	Thale cress	nucleus	44.83	38.42
AT3G63350.1	Thale cress	nucleus	31.03	38.3
CDY46607	Canola	nucleus	40.8	38.27
Bra023800.1-P	Field mustard	nucleus	43.68	38.19
CDY10311	Canola	nucleus	42.53	38.14
Bra033913.1-P	Field mustard	nucleus	44.25	37.84
CDX76693	Canola	nucleus	30.75	37.54
TraesCS3D01G280600.1	Wheat	nucleus	25.86	37.34
TraesCS4D01G358900.1	Wheat	nucleus	29.6	37.32
Bra001885.1-P	Field mustard	nucleus	40.8	36.32
TraesCS7D01G367700.1	Wheat	nucleus	27.3	35.85
CDX94884	Canola	nucleus	29.02	35.19
CDX92958	Canola	nucleus	32.76	33.14
TraesCS3D01G385900.1	Wheat	nucleus	27.87	31.7
TraesCS4D01G239600.1	Wheat	nucleus	34.48	31.25
TraesCS3D01G386000.1	Wheat	nucleus	27.59	30.57
TraesCS3D01G227200.1	Wheat	nucleus	28.16	30.53
TraesCS5D01G553300.1	Wheat	nucleus	43.68	29.12
TraesCS6D01G083800.1	Wheat	nucleus	34.77	26.42
TraesCS2D01G211400.1	Wheat	nucleus	33.91	23.65
TraesCS3D01G289000.1	Wheat	nucleus	26.72	22.36

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF139	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:TraesCS5D01G445100
EnsemblPlants:TraesCS5D01G445100.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:495626125..495628876

Molecular Weight (calculated)

38902.8 Da

IEP (calculated)

5.292

GRAVY (calculated)

-0.648

Length

348 amino acids

Sequence
(BLAST)

001: MMNPVKVEGR PTPTPSPAAA GGGGAPRPMD GLGDAGPTPF LAKTYDMVDD PATDAVVSWT ATSNSFVVWD PHLFATLLLP SYFKHSNFSS FVRQLNTYGF
101: RKVDPDRWEF ANEGFLRGQR HLLRNIKRRK PTHGSQNQQS LASYLEVGNF GHDVEIDHLK RDKQLLMAEV VKLRQEQQNT RSGLQAMEKR LQGTEQKQQQ
201: MMSFLARVMQ NPVFIRQLIS QSEMRKELED AISNKRRRRI DQGPEAVDSM GTGSTLEQGS HVMFEQQEPV DSFVNGVISD LESSSVDTKG AEVQQSVASS
301: RSEQLRGRPS GELNDDFWED LLHEGGLGEE ASNLVVPDDM NLLAEKLD

Best Arabidopsis Sequence Match ( AT3G22830.1 )
(BLAST)

001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN

Arabidopsis Description

HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.