Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400049793 | Potato | nucleus | 91.4 | 93.41 |
| PGSC0003DMT400049795 | Potato | nucleus | 88.44 | 91.39 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 62.9 | 64.82 |
| AT3G51910.1 | Thale cress | nucleus | 43.82 | 59.93 |
| KRG95588 | Soybean | nucleus | 59.41 | 59.73 |
| Bra012829.1-P | Field mustard | nucleus | 39.52 | 59.27 |
| Bra012828.1-P | Field mustard | nucleus | 41.67 | 57.62 |
| CDX90626 | Canola | nucleus | 41.67 | 57.62 |
| KRH67266 | Soybean | nucleus | 59.41 | 57.25 |
| CDX95313 | Canola | nucleus | 41.13 | 57.09 |
| Solyc06g053960.2.1 | Tomato | nucleus | 21.51 | 56.34 |
| CDY29054 | Canola | nucleus | 40.05 | 56.23 |
| CDX90627 | Canola | nucleus | 41.94 | 54.36 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 42.2 | 54.14 |
| KRH32059 | Soybean | nucleus | 47.04 | 51.32 |
| AT3G63350.1 | Thale cress | nucleus | 38.71 | 51.06 |
| Bra007739.1-P | Field mustard | nucleus | 38.17 | 49.82 |
| CDX76693 | Canola | nucleus | 38.17 | 49.82 |
| CDY11470 | Canola | nucleus | 38.17 | 49.82 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 40.32 | 48.7 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 42.47 | 47.31 |
| Os10t0419300-00 | Rice | nucleus | 44.62 | 46.37 |
| Solyc09g082670.2.1 | Tomato | nucleus | 44.35 | 46.35 |
| EER93298 | Sorghum | nucleus | 42.2 | 46.31 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 43.28 | 46.26 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 43.01 | 46.24 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 43.55 | 45.89 |
| EER94213 | Sorghum | nucleus | 44.62 | 45.86 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 41.94 | 45.75 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 41.94 | 45.75 |
| Zm00001d032923_P002 | Maize | nucleus | 43.82 | 45.66 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 41.67 | 45.45 |
| Os07t0178600-01 | Rice | nucleus | 45.16 | 45.16 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 41.67 | 45.06 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 40.05 | 44.74 |
| EER95940 | Sorghum | nucleus | 44.62 | 44.62 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 42.47 | 44.13 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 44.09 | 44.09 |
| EER95463 | Sorghum | nucleus | 45.97 | 43.73 |
| Os03t0161900-02 | Rice | nucleus | 44.35 | 43.54 |
| Zm00001d018941_P001 | Maize | nucleus | 43.82 | 43.47 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 42.47 | 43.41 |
| Zm00001d027757_P001 | Maize | nucleus | 44.62 | 43.23 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 42.2 | 42.66 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 44.62 | 40.29 |
| EER90889 | Sorghum | nucleus | 39.78 | 39.89 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 43.28 | 39.75 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 44.62 | 39.71 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 44.09 | 39.71 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 39.78 | 39.26 |
| Zm00001d033987_P001 | Maize | nucleus | 38.98 | 39.08 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 38.98 | 38.98 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 38.71 | 38.81 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 40.59 | 38.04 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 41.13 | 35.33 |
| Solyc07g040680.2.1 | Tomato | nucleus | 33.6 | 35.11 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 44.09 | 31.48 |
| Solyc08g005170.2.1 | Tomato | nucleus | 39.25 | 27.7 |
| Solyc08g076590.2.1 | Tomato | nucleus | 36.29 | 27.55 |
| Solyc03g097120.2.1 | Tomato | nucleus | 36.02 | 27.29 |
| Solyc07g055710.2.1 | Tomato | nucleus | 27.96 | 26.8 |
| Solyc06g072750.2.1 | Tomato | nucleus | 34.41 | 26.56 |
| Solyc02g072000.2.1 | Tomato | nucleus | 29.03 | 26.47 |
| Solyc12g098520.1.1 | Tomato | nucleus | 33.33 | 25.94 |
| Solyc03g006000.2.1 | Tomato | nucleus | 27.69 | 25.69 |
| Zm00001d034433_P003 | Maize | nucleus | 42.74 | 25.6 |
| Solyc12g007070.1.1 | Tomato | nucleus | 23.39 | 23.58 |
| Solyc09g009100.2.1 | Tomato | nucleus | 31.99 | 23.38 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | UniProt:K4CUJ2 | PFAM:PF00447 |
| PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 |
| EnsemblPlantsGene:Solyc09g065660.2 | EnsemblPlants:Solyc09g065660.2.1 | UniParc:UPI000276C928 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
No Description!
Coordinates
chr9:+:63876345..63878476
Molecular Weight (calculated)
42444.8 Da
IEP (calculated)
5.054
GRAVY (calculated)
-0.823
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQLYSVKEE FPGSSSGGGG GGEPPPATPQ PMEGLHDIGP PPFLTKTYEM VDDSSTDHIV SWNRGGQSFV VWDPHSFSTT LLPKFFKHNN FSSFVRQLNT
101: YGFRKIDPER WEFANEAFLK GSKHLLRNIK RRKTPNSSQP LPSTEQGLGP CVELGRFGFD GEVDRLRRDK QVLMTELVKL RQNQQNTRAY LRSLEVRLQG
201: TERKQQQMMN FLARAMQNPE FVQQLIQQKG KRREIEEDIT KKRRRPIDPQ GPSATLHVGG SSHSIKSEPL EFGEANEFQV SELEALALEM QGYGRARKDQ
301: QEEYTIEGLE QFGNTDKELD VGFWEELFND EDVSGNEDGE EEDVDVLAES EFSSIQRRMK KAAIWIDQLL VG
101: YGFRKIDPER WEFANEAFLK GSKHLLRNIK RRKTPNSSQP LPSTEQGLGP CVELGRFGFD GEVDRLRRDK QVLMTELVKL RQNQQNTRAY LRSLEVRLQG
201: TERKQQQMMN FLARAMQNPE FVQQLIQQKG KRREIEEDIT KKRRRPIDPQ GPSATLHVGG SSHSIKSEPL EFGEANEFQV SELEALALEM QGYGRARKDQ
301: QEEYTIEGLE QFGNTDKELD VGFWEELFND EDVSGNEDGE EEDVDVLAES EFSSIQRRMK KAAIWIDQLL VG
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.