Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24430_001 | Banana | nucleus | 69.97 | 75.65 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 55.56 | 63.79 |
| Solyc06g053960.2.1 | Tomato | nucleus | 24.92 | 58.45 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 57.06 | 56.89 |
| GSMUA_Achr3P06020_001 | Banana | nucleus | 23.72 | 51.97 |
| Os10t0419300-00 | Rice | nucleus | 52.85 | 49.16 |
| EER94213 | Sorghum | nucleus | 52.55 | 48.34 |
| Zm00001d032923_P002 | Maize | nucleus | 51.65 | 48.18 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 53.15 | 47.58 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 47.45 | 46.33 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 47.45 | 46.33 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 47.45 | 46.33 |
| KRH31657 | Soybean | nucleus | 46.85 | 46.29 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 47.45 | 45.93 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 50.75 | 45.92 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 49.55 | 45.71 |
| KRG95588 | Soybean | nucleus | 50.75 | 45.68 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 48.95 | 45.53 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 49.25 | 45.05 |
| AT3G51910.1 | Thale cress | nucleus | 36.64 | 44.85 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 42.04 | 44.73 |
| CDX95313 | Canola | nucleus | 35.44 | 44.03 |
| KRH67266 | Soybean | nucleus | 50.75 | 43.78 |
| CDY29054 | Canola | nucleus | 34.53 | 43.4 |
| KRG91367 | Soybean | nucleus | 47.45 | 43.17 |
| Bra012829.1-P | Field mustard | nucleus | 32.13 | 43.15 |
| Os03t0161900-02 | Rice | nucleus | 48.95 | 43.01 |
| CDX94887 | Canola | nucleus | 34.83 | 42.96 |
| Bra012828.1-P | Field mustard | nucleus | 34.53 | 42.75 |
| CDX90626 | Canola | nucleus | 34.53 | 42.75 |
| KRH32059 | Soybean | nucleus | 43.54 | 42.52 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 34.83 | 42.49 |
| EER95463 | Sorghum | nucleus | 49.55 | 42.2 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 44.14 | 41.76 |
| Zm00001d027757_P001 | Maize | nucleus | 47.75 | 41.41 |
| KRH35452 | Soybean | nucleus | 45.05 | 40.98 |
| Solyc09g082670.2.1 | Tomato | nucleus | 43.24 | 40.45 |
| CDX94884 | Canola | nucleus | 34.83 | 40.42 |
| PGSC0003DMT400049793 | Potato | nucleus | 44.14 | 40.38 |
| CDY10674 | Canola | nucleus | 46.85 | 40.1 |
| Solyc09g065660.2.1 | Tomato | nucleus | 44.74 | 40.05 |
| PGSC0003DMT400049795 | Potato | nucleus | 43.24 | 40.0 |
| PGSC0003DMT400016511 | Potato | nucleus | 43.24 | 39.78 |
| AT3G63350.1 | Thale cress | nucleus | 33.63 | 39.72 |
| Bra007739.1-P | Field mustard | nucleus | 33.93 | 39.65 |
| CDY11470 | Canola | nucleus | 33.93 | 39.65 |
| CDX90627 | Canola | nucleus | 33.93 | 39.37 |
| CDY34229 | Canola | nucleus | 44.74 | 39.31 |
| CDX76693 | Canola | nucleus | 33.63 | 39.3 |
| CDY10311 | Canola | nucleus | 45.65 | 39.18 |
| PGSC0003DMT400041944 | Potato | nucleus | 39.94 | 38.66 |
| CDY46607 | Canola | nucleus | 42.94 | 38.54 |
| Bra001885.1-P | Field mustard | nucleus | 45.05 | 38.36 |
| Bra033913.1-P | Field mustard | nucleus | 46.85 | 38.33 |
| AT3G22830.1 | Thale cress | nucleus | 46.55 | 38.18 |
| CDY46606 | Canola | nucleus | 43.54 | 37.86 |
| CDX92958 | Canola | nucleus | 38.74 | 37.5 |
| Bra023800.1-P | Field mustard | nucleus | 44.74 | 37.44 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 24.62 | 37.1 |
| CDY14893 | Canola | nucleus | 29.13 | 37.02 |
| AT5G43840.1 | Thale cress | nucleus | 31.23 | 36.88 |
| GSMUA_Achr2P21640_001 | Banana | nucleus | 36.64 | 36.75 |
| Bra035993.1-P | Field mustard | nucleus | 30.33 | 35.94 |
| GSMUA_Achr7P24790_001 | Banana | nucleus | 21.32 | 33.97 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 28.23 | 32.53 |
| GSMUA_Achr3P15740_001 | Banana | nucleus | 26.73 | 32.25 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 40.24 | 30.52 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 38.74 | 30.28 |
| GSMUA_Achr10P... | Banana | nucleus | 26.13 | 28.52 |
| GSMUA_Achr3P31860_001 | Banana | nucleus | 27.33 | 28.09 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 40.54 | 27.72 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 30.93 | 27.03 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 25.83 | 26.3 |
| GSMUA_Achr8P27820_001 | Banana | nucleus | 28.53 | 26.17 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 30.33 | 25.7 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 33.93 | 24.94 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 32.43 | 22.22 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 31.23 | 19.01 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr1G27200_001 | EnsemblPlants:GSMUA_Achr1P27200_001 | EnsemblPlants:GSMUA_Achr1T27200_001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | UniProt:M0S3H7 | PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0002951F95 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
Heat stress transcription factor A-2c [Source:GMGC_GENE;Acc:GSMUA_Achr1G27200_001]
Coordinates
chr1:+:23837629..23840426
Molecular Weight (calculated)
38934.9 Da
IEP (calculated)
4.946
GRAVY (calculated)
-0.801
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLPDIVKE EYPETSSYNI EDSFMEPPRP MEGLHEVGPP PFLTKTFDMV DDPVTDQVVS WSLTSNSFVV RDPHAFAVTL LPRYFKHNNF SSFVRQLNTY
101: LEFIFNANDF LLHLNFSCVR KGFRKVDPDR WEFANEGFLR GQKHLLKTIK RRKPPSNPLP RQQSMGSFLE VVKLRQEQQN TRTQLQAMEE RVQSTEQKQQ
201: QTMTFLACAL QNPDFFQQLV QQQEKRKQLE EAISKKRRRP IEAGPWVYEP EFFQLDGLSM EIHGLGRNEE AENKPGEKHE GGYTELNDEF WEALFKERIE
301: EEKGGPEWVE RGEDDDIVVL AEKLGYLTSN SPK
101: LEFIFNANDF LLHLNFSCVR KGFRKVDPDR WEFANEGFLR GQKHLLKTIK RRKPPSNPLP RQQSMGSFLE VVKLRQEQQN TRTQLQAMEE RVQSTEQKQQ
201: QTMTFLACAL QNPDFFQQLV QQQEKRKQLE EAISKKRRRP IEAGPWVYEP EFFQLDGLSM EIHGLGRNEE AENKPGEKHE GGYTELNDEF WEALFKERIE
301: EEKGGPEWVE RGEDDDIVVL AEKLGYLTSN SPK
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.