Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g082670.2.1 | Tomato | nucleus | 94.2 | 95.79 |
| PGSC0003DMT400041944 | Potato | nucleus | 49.72 | 52.33 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 41.71 | 52.07 |
| KRG91367 | Soybean | nucleus | 52.49 | 51.91 |
| KRH31657 | Soybean | nucleus | 48.07 | 51.63 |
| KRH35452 | Soybean | nucleus | 51.93 | 51.37 |
| CDY34229 | Canola | nucleus | 53.59 | 51.19 |
| CDX94887 | Canola | nucleus | 38.12 | 51.11 |
| CDY10674 | Canola | nucleus | 54.14 | 50.39 |
| CDY10311 | Canola | nucleus | 53.59 | 50.0 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 45.03 | 48.8 |
| AT3G22830.1 | Thale cress | nucleus | 54.7 | 48.77 |
| CDY46606 | Canola | nucleus | 51.38 | 48.56 |
| Bra023800.1-P | Field mustard | nucleus | 53.31 | 48.49 |
| Bra033913.1-P | Field mustard | nucleus | 54.14 | 48.16 |
| CDX94884 | Canola | nucleus | 38.12 | 48.08 |
| CDY46607 | Canola | nucleus | 49.17 | 47.98 |
| Bra001885.1-P | Field mustard | nucleus | 50.55 | 46.8 |
| PGSC0003DMT400049793 | Potato | nucleus | 46.96 | 46.7 |
| Os10t0419300-00 | Rice | nucleus | 46.13 | 46.65 |
| PGSC0003DMT400049795 | Potato | nucleus | 46.13 | 46.39 |
| Zm00001d032923_P002 | Maize | nucleus | 45.58 | 46.22 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 38.95 | 45.78 |
| CDX92958 | Canola | nucleus | 43.09 | 45.35 |
| EER94213 | Sorghum | nucleus | 45.3 | 45.3 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 43.65 | 44.89 |
| EER93298 | Sorghum | nucleus | 41.99 | 44.84 |
| EER95940 | Sorghum | nucleus | 45.58 | 44.35 |
| CDY14893 | Canola | nucleus | 32.04 | 44.27 |
| AT5G43840.1 | Thale cress | nucleus | 34.25 | 43.97 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 41.71 | 43.64 |
| Zm00001d018941_P001 | Maize | nucleus | 45.03 | 43.47 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 40.88 | 43.4 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 40.88 | 43.4 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 41.16 | 43.31 |
| Os07t0178600-01 | Rice | nucleus | 44.48 | 43.28 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 44.48 | 43.28 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 39.78 | 43.24 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 43.92 | 43.21 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 41.44 | 43.1 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 42.54 | 43.02 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 41.71 | 42.78 |
| Bra035993.1-P | Field mustard | nucleus | 33.15 | 42.7 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 42.82 | 42.58 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 40.06 | 42.52 |
| EER95463 | Sorghum | nucleus | 43.09 | 39.9 |
| Os03t0161900-02 | Rice | nucleus | 41.71 | 39.84 |
| PGSC0003DMT400021234 | Potato | nucleus | 38.4 | 39.38 |
| Zm00001d027757_P001 | Maize | nucleus | 41.71 | 39.32 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 43.92 | 39.26 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 45.3 | 39.23 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 44.48 | 38.98 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 44.2 | 38.84 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 39.5 | 38.54 |
| EER90889 | Sorghum | nucleus | 39.5 | 38.54 |
| Zm00001d033987_P001 | Maize | nucleus | 39.5 | 38.54 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 39.78 | 38.2 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 38.95 | 37.9 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 40.33 | 36.78 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 39.23 | 32.79 |
| PGSC0003DMT400082752 | Potato | nucleus | 29.01 | 29.09 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 41.71 | 28.98 |
| PGSC0003DMT400044683 | Potato | nucleus | 30.39 | 26.7 |
| PGSC0003DMT400008199 | Potato | nucleus | 36.19 | 26.63 |
| PGSC0003DMT400038381 | Potato | nucleus | 36.46 | 26.51 |
| PGSC0003DMT400071487 | Potato | nucleus | 29.01 | 26.05 |
| PGSC0003DMT400069550 | Potato | nucleus | 34.53 | 25.99 |
| PGSC0003DMT400001025 | Potato | nucleus | 26.24 | 25.82 |
| PGSC0003DMT400046000 | Potato | nucleus | 36.19 | 25.79 |
| Zm00001d034433_P003 | Maize | nucleus | 42.27 | 24.64 |
| PGSC0003DMT400006917 | Potato | nucleus | 32.32 | 23.54 |
| PGSC0003DMT400011871 | Potato | nucleus | 29.01 | 21.97 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:102602460 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | UniProt:M1A7S2 |
| PFAM:PF00447 | EnsemblPlantsGene:PGSC0003DMG400006447 | PGSC:PGSC0003DMG400006447 | EnsemblPlants:PGSC0003DMT400016511 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000294C0C7 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | RefSeq:XP_006363482.1 | SEG:seg | : | : | : |
Description
Heat shock factor protein HSF30 [Source:PGSC_GENE;Acc:PGSC0003DMG400006447]
Coordinates
chr9:+:54430264..54432804
Molecular Weight (calculated)
42265.8 Da
IEP (calculated)
5.464
GRAVY (calculated)
-0.931
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNFGVPIK EEFPRSNEPS MWIPQPMEGL HENGPPPFLT KTYEFVDDQN TNNVVSWSIG NNSFIVWDPQ TFAMNLLPRY FKHSNFSSFV RQLNTYGFRK
101: VNPDQWEFAH EGFLRGQRHL LKTIRRRKTS NFHPGQGSNQ GIDSYIELGK LEIDGEIDRL RREKKDLMME LVELKQHQQT TKSNIKSMEE KLKRTEAKQQ
201: QMMNFLAKAM QNPRFLEQMM QQKERRKELE EEIKNKRRRQ IDHHQGPSNI VGDLDHSVNN SDGNFNIKME PHEYYYGEMN GFDDLELEAS LAMSMQGGPS
301: GNTINFEKGY NIENKSIDHE GFWEGLLNEN IEDVINLLEG ENEEDHVDIL AHQLGFLGST PK
101: VNPDQWEFAH EGFLRGQRHL LKTIRRRKTS NFHPGQGSNQ GIDSYIELGK LEIDGEIDRL RREKKDLMME LVELKQHQQT TKSNIKSMEE KLKRTEAKQQ
201: QMMNFLAKAM QNPRFLEQMM QQKERRKELE EEIKNKRRRQ IDHHQGPSNI VGDLDHSVNN SDGNFNIKME PHEYYYGEMN GFDDLELEAS LAMSMQGGPS
301: GNTINFEKGY NIENKSIDHE GFWEGLLNEN IEDVINLLEG ENEEDHVDIL AHQLGFLGST PK
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.