Factsheet for PGSC0003DMT400006917

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009100.2.1	Tomato	nucleus	89.54	87.43
KRH20029	Soybean	nucleus	44.06	48.24
Bra009515.1-P	Field mustard	nucleus	35.01	47.93
CDX70290	Canola	nucleus	35.01	47.93
KRH32651	Soybean	nucleus	43.86	47.39
VIT_08s0007g03900.t01	Wine grape	nucleus	49.3	46.14
KRH67848	Soybean	nucleus	38.03	44.68
CDY10361	Canola	nucleus	36.02	44.64
AT5G03720.1	Thale cress	nucleus	35.01	42.23
GSMUA_Achr5P15900_001	Banana	nucleus	36.22	32.91
PGSC0003DMT400049793	Potato	nucleus	23.94	32.69
PGSC0003DMT400049795	Potato	nucleus	23.54	32.5
PGSC0003DMT400016511	Potato	nucleus	23.54	32.32
PGSC0003DMT400041944	Potato	nucleus	21.93	31.69
PGSC0003DMT400021234	Potato	nucleus	22.13	31.16
PGSC0003DMT400082752	Potato	nucleus	22.54	31.02
PGSC0003DMT400069550	Potato	nucleus	25.15	25.99
PGSC0003DMT400008199	Potato	nucleus	24.35	24.59
PGSC0003DMT400038381	Potato	nucleus	24.35	24.3
PGSC0003DMT400001025	Potato	nucleus	17.91	24.18
PGSC0003DMT400046000	Potato	nucleus	24.35	23.82
PGSC0003DMT400071487	Potato	nucleus	19.11	23.57
PGSC0003DMT400044683	Potato	nucleus	19.52	23.54
PGSC0003DMT400011871	Potato	nucleus	21.33	22.18

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009408	GO:GO:0009628	GO:GO:0009719	GO:GO:0009987	GO:GO:0010200	GO:GO:0043565
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	UniProt:M0ZS57	PFAM:PF00447	EnsemblPlantsGene:PGSC0003DMG401002683
PGSC:PGSC0003DMG401002683	EnsemblPlants:PGSC0003DMT400006917	PRINTS:PR00056	PANTHER:PTHR10015	PANTHER:PTHR10015:SF164	SMART:SM00415
SUPFAM:SSF46785	UniParc:UPI000295CB9E	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:

Description

Heat stress transcription factor A3 [Source:PGSC_GENE;Acc:PGSC0003DMG401002683]

Coordinates

chr9:+:3850276..3852434

Molecular Weight (calculated)

54777.4 Da

IEP (calculated)

4.510

GRAVY (calculated)

-0.384

Length

497 amino acids

Sequence
(BLAST)

001: MDSEFAAFSP ISLPFADPSS PFINFGSFAT PLSQQPVGEG GEIEQLAEEG MGVPHPMECL HGIQIPPFLS KTFDLVEDPL LDSIISWGRN GDSFVVWDPV
101: EFSRLVLPRN FKHSNFSSFV RQLNTYVVST IFVSELLLGN FIQGFRKIDA DRWEFANEGF LRGKRHLLKN IQRRKSHQAG SSSGSSAEAG KGTMDEIEKL
201: RNEKSLMMQE VVELQQQQRG TVQQMESVNE KLQAAEQRQK QMVSFLAKVL QNPTFLARVR QMKEQGEITC PRTMRKFVKY QPHGPDGVGS SSMEGQIVKV
301: RSDFQDLAAC FESPDFNPVV DQQLPETGLG AEAMPFEGGT VASEELTVAH ELFNCSDREI GGASFFNPEG SHFKGKNVAS LQLEVMPEYF ASFPEEMGKE
401: KNISGFSSPA IGSMVKDEEL WSMGFEASAG MPSAGTELWD SLSSYVPDFG VSSGLSDLWD IDPLQAAGSS GVDKWPADGS PFGQSESHAN QPKNDSF

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.