Factsheet for PGSC0003DMT400082752

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g040680.2.1	Tomato	nucleus	91.97	93.26
PGSC0003DMT400021234	Potato	nucleus	36.29	37.11
AT5G54070.1	Thale cress	nucleus	30.47	33.23
PGSC0003DMT400049795	Potato	nucleus	32.69	32.78
PGSC0003DMT400049793	Potato	nucleus	32.96	32.69
KRH02689	Soybean	nucleus	34.63	30.94
KRH19208	Soybean	nucleus	34.9	30.88
PGSC0003DMT400041944	Potato	nucleus	29.09	30.52
PGSC0003DMT400016511	Potato	nucleus	29.09	29.01
PGSC0003DMT400071487	Potato	nucleus	27.15	24.32
PGSC0003DMT400008199	Potato	nucleus	31.58	23.17
PGSC0003DMT400044683	Potato	nucleus	26.04	22.82
PGSC0003DMT400006917	Potato	nucleus	31.02	22.54
PGSC0003DMT400038381	Potato	nucleus	30.47	22.09
PGSC0003DMT400011871	Potato	nucleus	29.09	21.97
PGSC0003DMT400001025	Potato	nucleus	22.16	21.74
PGSC0003DMT400046000	Potato	nucleus	30.47	21.65
PGSC0003DMT400069550	Potato	nucleus	28.53	21.41

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:102591828	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	UniProt:M1D670
PFAM:PF00447	EnsemblPlantsGene:PGSC0003DMG400032793	PGSC:PGSC0003DMG400032793	EnsemblPlants:PGSC0003DMT400082752	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF217	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00029568F4	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	RefSeq:XP_006357708.1	SEG:seg	:	:	:

Description

Heat stress transcription factor HSFA9 [Source:PGSC_GENE;Acc:PGSC0003DMG400032793]

Coordinates

chr7:+:36269190..36271391

Molecular Weight (calculated)

41763.4 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.825

Length

361 amino acids

Sequence
(BLAST)

001: MEEETMREEK TMVIDVNENE KNVNGGVVLE VKEEPVIFID EDDIIGDFTC SLPKPLDGLR DVGPPPFLKK TFEMVDDPNT DSIISWSNNQ NSFVVWDPHK
101: FSIHLLPKHF KHNNFSSFIR QLNTYRFRKI DSVRWEFANE GFQKGKKHLL VNIKRRKQYP QQGGGAKSWV GGCCKDGTEA AEIEKLKKDH NTLKMEILKL
201: KQQQESTDTY LATMNERLQN SETKQKYMVI FMAKTFNNPQ FVQHLIEKMK QGGKTTTVEN GTKKRRLYSD ENQEEYTTIK SEIHTLFSCD ESSNSPVEEQ
301: KGKGNNNSSP EMVSENYILW EKLMEDDMIC ENGAETDKYQ SEIVLELEDL ISNPSECKCM P

Best Arabidopsis Sequence Match ( AT1G32330.1 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.