Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32651 | Soybean | nucleus | 90.09 | 88.91 |
| KRH67848 | Soybean | nucleus | 54.19 | 58.16 |
| Bra009515.1-P | Field mustard | nucleus | 40.97 | 51.24 |
| CDX70290 | Canola | nucleus | 40.97 | 51.24 |
| CDY10361 | Canola | nucleus | 41.41 | 46.88 |
| AT5G03720.1 | Thale cress | nucleus | 41.41 | 45.63 |
| PGSC0003DMT400006917 | Potato | nucleus | 48.24 | 44.06 |
| Solyc09g009100.2.1 | Tomato | nucleus | 48.9 | 43.61 |
| VIT_08s0007g03900.t01 | Wine grape | nucleus | 50.88 | 43.5 |
| KRH32059 | Soybean | nucleus | 27.31 | 36.36 |
| KRH31657 | Soybean | nucleus | 25.77 | 34.72 |
| KRG91367 | Soybean | nucleus | 26.65 | 33.06 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 38.99 | 32.36 |
| KRH05436 | Soybean | nucleus | 24.67 | 31.55 |
| KRH61515 | Soybean | nucleus | 25.77 | 31.45 |
| KRH35452 | Soybean | nucleus | 25.33 | 31.42 |
| KRG95588 | Soybean | nucleus | 25.33 | 31.08 |
| KRH15573 | Soybean | nucleus | 24.01 | 29.95 |
| KRH67266 | Soybean | nucleus | 25.33 | 29.79 |
| KRH39283 | Soybean | nucleus | 20.26 | 28.75 |
| KRH19208 | Soybean | nucleus | 24.45 | 27.21 |
| KRH21206 | Soybean | nucleus | 23.35 | 27.04 |
| KRH02689 | Soybean | nucleus | 24.01 | 26.98 |
| KRH77766 | Soybean | nucleus | 27.31 | 26.72 |
| KRH07474 | Soybean | nucleus | 29.96 | 26.67 |
| KRH59030 | Soybean | nucleus | 23.57 | 26.62 |
| KRH74387 | Soybean | nucleus | 28.63 | 26.53 |
| KRH11063 | Soybean | nucleus | 22.91 | 26.53 |
| KRH27709 | Soybean | nucleus | 26.87 | 26.29 |
| KRH39566 | Soybean | nucleus | 28.85 | 26.2 |
| KRH42919 | Soybean | nucleus | 22.91 | 25.87 |
| KRH58845 | Soybean | nucleus | 24.23 | 22.96 |
| KRH42748 | Soybean | nucleus | 23.35 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100780835 | MapMan:15.5.13 | EMBL:ACUP02008226 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G151200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| UniProt:I1LZF5 | InterPro:IPR036388 | EnsemblPlants:KRH20029 | ProteinID:KRH20029 | ProteinID:KRH20029.1 | PFAM:PF00447 |
| PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF164 | SMART:SM00415 | SUPFAM:SSF46785 |
| UniParc:UPI000233D063 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:+:26538301..26541831
Molecular Weight (calculated)
51112.1 Da
IEP (calculated)
4.941
GRAVY (calculated)
-0.570
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPNDANSPK PLEILQMNPV PPFLSKTFDL VDDPTLDPII SWGSTGFSFV VWDPLEFARI VLPRHFKHNN FSSFVRQLNT YGFRKIDTDK WEFFNEAFQR
101: GKKHLLKNIQ RRRSSQSQQV GSYIGIECST EAGRSDVEIE IERLRKERTM LMEEVVDLKQ EQRRMAHRAG EVNQRLQSTE QRQKQMVSFL VKLIQNPAFL
201: ARLRHEEQKE IDSPRVVRKF VKQHQHETGT AETLQEGQIV RYQHDWRNIG MSSETPKLSP VSIEQSPHYL SQGLAGEVSV GAEDLTAQIE NIVSNDLAAV
301: HGITVSQEIM IGEGLSSFGA EDPLFKGKSV MSPILEVPPE YFASFPEGLT KGKDFQDFSA LGTEGMIKLE DIWDSGLNVS GAASGSGNEL WSNHVNYEEF
401: PEFGVTSGMS DSDIWDIGLG SLGIDKWPTD EPSLGETNGQ AGQPKEDRPK NFGP
101: GKKHLLKNIQ RRRSSQSQQV GSYIGIECST EAGRSDVEIE IERLRKERTM LMEEVVDLKQ EQRRMAHRAG EVNQRLQSTE QRQKQMVSFL VKLIQNPAFL
201: ARLRHEEQKE IDSPRVVRKF VKQHQHETGT AETLQEGQIV RYQHDWRNIG MSSETPKLSP VSIEQSPHYL SQGLAGEVSV GAEDLTAQIE NIVSNDLAAV
301: HGITVSQEIM IGEGLSSFGA EDPLFKGKSV MSPILEVPPE YFASFPEGLT KGKDFQDFSA LGTEGMIKLE DIWDSGLNVS GAASGSGNEL WSNHVNYEEF
401: PEFGVTSGMS DSDIWDIGLG SLGIDKWPTD EPSLGETNGQ AGQPKEDRPK NFGP
001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
Arabidopsis Description
HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.