Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35452 | Soybean | nucleus | 87.98 | 87.98 |
| KRH31657 | Soybean | nucleus | 59.02 | 64.09 |
| Solyc06g053960.2.1 | Tomato | nucleus | 24.32 | 62.68 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 45.36 | 57.24 |
| KRG95588 | Soybean | nucleus | 55.19 | 54.59 |
| CDX94887 | Canola | nucleus | 40.16 | 54.44 |
| Solyc09g082670.2.1 | Tomato | nucleus | 52.73 | 54.21 |
| CDY34229 | Canola | nucleus | 54.64 | 52.77 |
| KRH32059 | Soybean | nucleus | 48.91 | 52.49 |
| PGSC0003DMT400016511 | Potato | nucleus | 51.91 | 52.49 |
| CDY46606 | Canola | nucleus | 54.64 | 52.22 |
| CDY10674 | Canola | nucleus | 55.46 | 52.19 |
| AT3G22830.1 | Thale cress | nucleus | 57.65 | 51.97 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 49.73 | 51.7 |
| KRH67266 | Soybean | nucleus | 54.37 | 51.55 |
| CDY10311 | Canola | nucleus | 54.64 | 51.55 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 46.99 | 51.5 |
| CDY46607 | Canola | nucleus | 51.64 | 50.94 |
| Bra023800.1-P | Field mustard | nucleus | 55.19 | 50.75 |
| Bra033913.1-P | Field mustard | nucleus | 56.28 | 50.61 |
| Bra001885.1-P | Field mustard | nucleus | 53.55 | 50.13 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 42.08 | 50.0 |
| CDX94884 | Canola | nucleus | 39.07 | 49.83 |
| Os10t0419300-00 | Rice | nucleus | 48.36 | 49.44 |
| EER95940 | Sorghum | nucleus | 49.18 | 48.39 |
| EER94213 | Sorghum | nucleus | 47.27 | 47.79 |
| EER93298 | Sorghum | nucleus | 44.26 | 47.79 |
| Zm00001d018941_P001 | Maize | nucleus | 48.63 | 47.47 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 43.17 | 47.45 |
| PGSC0003DMT400041944 | Potato | nucleus | 44.54 | 47.38 |
| CDX92958 | Canola | nucleus | 44.54 | 47.38 |
| Zm00001d032923_P002 | Maize | nucleus | 46.17 | 47.34 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 44.54 | 47.11 |
| Os07t0178600-01 | Rice | nucleus | 47.27 | 46.51 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 47.27 | 46.51 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 46.72 | 46.47 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 43.99 | 46.26 |
| CDY14893 | Canola | nucleus | 33.06 | 46.18 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 45.08 | 46.09 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 42.9 | 46.04 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 45.63 | 45.88 |
| AT5G43840.1 | Thale cress | nucleus | 35.25 | 45.74 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 42.35 | 45.45 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 43.72 | 45.33 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 41.8 | 44.87 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 42.08 | 44.77 |
| Bra035993.1-P | Field mustard | nucleus | 34.15 | 44.48 |
| Os03t0161900-02 | Rice | nucleus | 45.63 | 44.06 |
| Zm00001d033987_P001 | Maize | nucleus | 44.26 | 43.67 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 44.54 | 43.24 |
| EER90889 | Sorghum | nucleus | 43.72 | 43.13 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 48.36 | 42.86 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 43.44 | 42.86 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 43.44 | 42.74 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 47.27 | 42.72 |
| EER95463 | Sorghum | nucleus | 45.36 | 42.46 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 48.36 | 42.34 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 47.54 | 42.23 |
| Zm00001d027757_P001 | Maize | nucleus | 44.26 | 42.19 |
| KRH61515 | Soybean | nucleus | 42.62 | 41.94 |
| KRH05436 | Soybean | nucleus | 39.89 | 41.13 |
| KRH15573 | Soybean | nucleus | 39.89 | 40.11 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 43.44 | 40.05 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 43.17 | 36.49 |
| KRH74387 | Soybean | nucleus | 43.17 | 32.24 |
| KRH39283 | Soybean | nucleus | 27.87 | 31.88 |
| KRH39566 | Soybean | nucleus | 43.17 | 31.6 |
| KRH07474 | Soybean | nucleus | 43.99 | 31.57 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 44.81 | 31.48 |
| KRH02689 | Soybean | nucleus | 34.15 | 30.94 |
| KRH77766 | Soybean | nucleus | 38.8 | 30.6 |
| KRH27709 | Soybean | nucleus | 38.8 | 30.6 |
| KRH19208 | Soybean | nucleus | 33.06 | 29.66 |
| KRH21206 | Soybean | nucleus | 29.51 | 27.55 |
| KRH11063 | Soybean | nucleus | 29.51 | 27.55 |
| KRH59030 | Soybean | nucleus | 29.78 | 27.11 |
| KRH20029 | Soybean | nucleus | 33.06 | 26.65 |
| KRH42919 | Soybean | nucleus | 29.23 | 26.62 |
| Zm00001d034433_P003 | Maize | nucleus | 44.81 | 26.41 |
| KRH32651 | Soybean | nucleus | 33.06 | 26.3 |
| KRH67848 | Soybean | nucleus | 29.78 | 25.77 |
| KRH58845 | Soybean | nucleus | 32.51 | 24.84 |
| KRH42748 | Soybean | nucleus | 31.42 | 24.11 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100809515 | MapMan:15.5.13 | EMBL:ACUP02012678 | ncoils:Coil | EnsemblPlantsGene:GLYMA_20G150300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| UniProt:I1NGK0 | InterPro:IPR036388 | EnsemblPlants:KRG91367 | ProteinID:KRG91367 | ProteinID:KRG91367.1 | PFAM:PF00447 |
| PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF262 | SMART:SM00415 | SUPFAM:SSF46785 |
| UniParc:UPI000233E353 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:38918462..38921017
Molecular Weight (calculated)
42180.9 Da
IEP (calculated)
4.776
GRAVY (calculated)
-0.659
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPHGQVKEE FLGESSSFCG GYDPQPILVV PQPIEGLHET GPPPFLTKTY DIVDDPSTNH IVSWSTGNNS FVVWDPQAFS ITLLPKFFKH NNFSSFVRQL
101: NTYGFRKVDP DKWEFANELF LRGQKILLKN IRRRKANHQS HAMQQQGVVE PCVEVGPFGL DGEVDRLRRD RQVLMVELVK LRQQQQSTKS HLQEMEGRLK
201: KTEQKQQQMM NFLARAMQNP NFVQQLAQQK EYWRKELEEA FSKKRRRPID QGPSNVVEVG GDDELLGCAE ECSNFVKLEP QEYTAKVLEF EVPDLPLVLN
301: LDEENIESQK RILEEDNIRL ESRDKDIDEV FWQDLLNEGI EDHGVLGVED VDVLANQLGY LASSPK
101: NTYGFRKVDP DKWEFANELF LRGQKILLKN IRRRKANHQS HAMQQQGVVE PCVEVGPFGL DGEVDRLRRD RQVLMVELVK LRQQQQSTKS HLQEMEGRLK
201: KTEQKQQQMM NFLARAMQNP NFVQQLAQQK EYWRKELEEA FSKKRRRPID QGPSNVVEVG GDDELLGCAE ECSNFVKLEP QEYTAKVLEF EVPDLPLVLN
301: LDEENIESQK RILEEDNIRL ESRDKDIDEV FWQDLLNEGI EDHGVLGVED VDVLANQLGY LASSPK
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.