Factsheet for Bra009515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70290	Canola	nucleus	100.0	100.0
CDY10361	Canola	nucleus	98.07	88.78
AT5G03720.1	Thale cress	nucleus	85.12	75.0
KRH67848	Soybean	nucleus	48.48	41.61
KRH20029	Soybean	nucleus	51.24	40.97
KRH32651	Soybean	nucleus	51.79	40.87
Bra012829.1-P	Field mustard	nucleus	25.07	36.69
PGSC0003DMT400006917	Potato	nucleus	47.93	35.01
Bra012828.1-P	Field mustard	nucleus	25.34	34.2
Solyc09g009100.2.1	Tomato	nucleus	47.66	33.99
VIT_08s0007g03900.t01	Wine grape	nucleus	48.48	33.15
Bra007739.1-P	Field mustard	nucleus	25.07	31.93
Bra035993.1-P	Field mustard	nucleus	24.24	31.32
Bra013253.1-P	Field mustard	nucleus	23.69	30.61
Bra015050.1-P	Field mustard	nucleus	25.07	29.45
Bra000557.1-P	Field mustard	nucleus	27.55	28.74
GSMUA_Achr5P15900_001	Banana	nucleus	39.94	26.51
Bra017595.1-P	Field mustard	nucleus	24.52	26.18
Bra040179.1-P	Field mustard	nucleus	30.85	25.93
Bra023584.1-P	Field mustard	nucleus	30.58	25.11
Bra023800.1-P	Field mustard	nucleus	27.27	24.87
Bra020988.1-P	Field mustard	nucleus	23.69	24.64
Bra001885.1-P	Field mustard	nucleus	26.45	24.55
Bra033913.1-P	Field mustard	nucleus	27.0	24.08
Bra021381.1-P	Field mustard	nucleus	30.03	24.01
Bra032023.1-P	Field mustard	nucleus	30.03	23.9
Bra001071.1-P	Field mustard	nucleus	29.75	23.84
Bra023258.1-P	Field mustard	nucleus	31.96	23.82
Bra008593.1-P	Field mustard	nucleus	30.03	22.57
Bra012571.1-P	Field mustard	nucleus	24.24	22.56
Bra035507.1-P	Field mustard	nucleus	25.07	21.31
Bra032752.1-P	Field mustard	nucleus	22.86	17.4
Bra013358.1-P	Field mustard	nucleus	24.52	17.21

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EnsemblPlantsGene:Bra009515	EnsemblPlants:Bra009515.1	EnsemblPlants:Bra009515.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628	GO:GO:0009719
GO:GO:0009987	GO:GO:0010200	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388
UniProt:M4CZ68	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF164
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002547B4A	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

AT5G03720 (E=4e-153) AT-HSFA3, HSFA3 | AT-HSFA3; DNA binding / transcription factor

Coordinates

chrA10:+:17026482..17028148

Molecular Weight (calculated)

41168.3 Da

IEP (calculated)

4.779

GRAVY (calculated)

-0.709

Length

363 amino acids

Sequence
(BLAST)

001: MPLDILHGNP IPPFLSKTFD LVDDPSLDPV ISWGLTGASF VVWDPVEFAR IILPRNFKHN NFSSFVRQLN TYGFRKIDTD KWEFANEAFL RGQKHLLKNI
101: HRRRSPQSNQ ACSSSITSQQ SQGSPTEVGE EIEKLRKERR ALMEEMVELQ QQNRGTARHV DTVNQRLKAA EQRQKQMLSF LAKLFQNPGF LDRLKSLKGE
201: GGGLGFEKAR KKFIKHSPTG GEIVKYEADD WERLLMSEEK DTENILPSNQ GMTSTDPKGK NLMNPSEEET MNQDYFLPFP TPEGLIKQEE TWSMGFDTTI
301: PSFSNEDVWG NTMDYNVAEF GSVPETSSGG CLPDVCWEQF AAGMTETGFN WPPGDDTTPM DDP

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.