Factsheet for Bra032023.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28731	Canola	nucleus	90.79	94.95
AT3G02990.1	Thale cress	nucleus	81.58	79.49
Bra021381.1-P	Field mustard	nucleus	78.95	79.3
Bra001071.1-P	Field mustard	nucleus	76.75	77.26
Bra023584.1-P	Field mustard	nucleus	60.31	62.22
Bra008593.1-P	Field mustard	nucleus	57.24	54.04
VIT_16s0039g01840.t01	Wine grape	nucleus, plastid	53.51	47.66
GSMUA_Achr4P04500_001	Banana	nucleus	45.61	47.38
KRH77766	Soybean	nucleus	47.15	46.34
KRH27709	Soybean	nucleus	46.27	45.47
PGSC0003DMT400008199	Potato	nucleus	47.15	43.7
Solyc03g097120.2.1	Tomato	nucleus	46.27	42.97
GSMUA_Achr3P27600_001	Banana	nucleus	40.13	42.96
Bra040179.1-P	Field mustard	nucleus	40.57	42.82
GSMUA_Achr4P17040_001	Banana	nucleus	45.39	42.51
Os03t0854500-01	Rice	nucleus	46.27	41.7
TraesCS5D01G553300.1	Wheat	nucleus	45.83	40.04
EER93074	Sorghum	nucleus	46.27	40.04
TraesCS4A01G322300.1	Wheat	nucleus	45.61	39.92
Zm00001d034886_P001	Maize	nucleus	46.05	39.85
TraesCS5B01G556200.1	Wheat	nucleus	46.05	39.7
Bra012829.1-P	Field mustard	nucleus	21.49	39.52
PGSC0003DMT400069550	Potato	nucleus	41.45	39.29
Solyc06g072750.2.1	Tomato	nucleus	40.79	38.59
Bra023258.1-P	Field mustard	nucleus	40.57	37.99
Zm00001d012823_P001	Maize	nucleus	45.61	37.41
Bra012828.1-P	Field mustard	nucleus	21.93	37.17
Bra035993.1-P	Field mustard	nucleus	22.81	37.01
Bra000557.1-P	Field mustard	nucleus	27.85	36.49
Bra035507.1-P	Field mustard	nucleus	33.99	36.3
Bra007739.1-P	Field mustard	nucleus	22.59	36.14
HORVU5Hr1G123770.1	Barley	nucleus	45.39	36.06
Bra001885.1-P	Field mustard	nucleus	28.51	33.25
Bra023800.1-P	Field mustard	nucleus	28.95	33.17
Bra033913.1-P	Field mustard	nucleus	28.95	32.43
Bra020988.1-P	Field mustard	nucleus	24.56	32.09
Bra013253.1-P	Field mustard	nucleus	19.74	32.03
Bra017595.1-P	Field mustard	nucleus	23.46	31.47
Bra015050.1-P	Field mustard	nucleus	21.27	31.39
Bra012571.1-P	Field mustard	nucleus	25.88	30.26
Bra009515.1-P	Field mustard	nucleus	23.9	30.03
Bra032752.1-P	Field mustard	nucleus	27.85	26.62
Bra013358.1-P	Field mustard	nucleus	25.44	22.44

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	MapMan:26.4.2.1	EnsemblPlantsGene:Bra032023	EnsemblPlants:Bra032023.1	EnsemblPlants:Bra032023.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	UniProt:M4ET93	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF162	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002545F9A	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

AT3G02990 (E=2e-183) ATHSFA1E, HSFA1E | ATHSFA1E; DNA binding / transcription factor

Coordinates

chrA02:+:26625011..26627451

Molecular Weight (calculated)

50661.3 Da

IEP (calculated)

4.839

GRAVY (calculated)

-0.564

Length

456 amino acids

Sequence
(BLAST)

001: MGSNSESVST VVSSIPPFLS KTYDMVDDPL TDEVVSWSSG NKSFVVWNVP EFARLFLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN EGFIRGQKQL
101: LKSIVRRKPS QVQPPQQPQV QHSSVGACVE VGKFGLEEEV ERLQRDKNVL TQELVRLRQQ QQVTEHHLQN VGQKVHVMEQ RQQQMMSFLA KAVQSPGFLN
201: QFSQQNNEGN NQHVSEGNKK RRLPAEEQKF SGGYGANGLS RQIVRYQSSM NEAADTMLEQ IHNMSNPQSR QEPLSNNHGS FLLGDVPNIS DNGSSTNGAS
301: GVTLADVSSN PPINYHVPCE ANQILEGSLP YSQVDLLSPN QGAAYGSSNS DVVGCETDNG ECLDPIMAVL AGSMGLEASA VNELLPGVQD PLWEQFFGER
401: PVIGDTEELL SGSVDDGLIM EQLELQSNLR NVLSNNQQMN HLTEQMGFLT SDALRK

Best Arabidopsis Sequence Match ( AT3G02990.1 )
(BLAST)

001: MGTVCESVAT AKSSTAVMSS IPPFLSKTYD MVDDPLTDDV VSWSSGNNSF VVWNVPEFAK QFLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL
101: RGQKQILKSI VRRKPAQVQP PQQPQVQHSS VGACVEVGKF GLEEEVERLQ RDKNVLMQEL VRLRQQQQVT EHHLQNVGQK VHVMEQRQQQ MMSFLAKAVQ
201: SPGFLNQFSQ QSNEANQHIS ESNKKRRLPV EDQMNSGSHG VNGLSRQIVR YQSSMNDATN TMLQQIQQMS NAPSHESLSS NNGSFLLGDV PNSNISDNGS
301: SSNGSPEVTL ADVSSIPAGF YPAMKYHEPC ETNQVMETNL PFSQGDLLPP TQGAAASGSS SSDLVGCETD NGECLDPIMA VLDGALELEA DTLNELLPEV
401: QDSFWEQFIG ESPVIGETDE LISGSVENEL ILEQLELQST LSNVWSKNQQ MNHLTEQMGL LTSDALRK

Arabidopsis Description

HSFA1EHeat stress transcription factor A-1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.