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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G393200.1 Wheat nucleus 92.99 92.99
TraesCS3B01G425200.1 Wheat nucleus 86.94 89.8
TraesCS3D01G385900.1 Wheat nucleus 85.99 88.24
HORVU3Hr1G088890.2 Barley nucleus 76.75 83.39
TraesCS3D01G227200.1 Wheat nucleus 84.08 82.24
Os01t0625300-01 Rice nucleus 67.52 62.54
Zm00001d044168_P001 Maize nucleus 64.33 61.03
EES01103 Sorghum nucleus 66.56 57.26
Zm00001d011406_P001 Maize nucleus 63.69 51.68
GSMUA_Achr3P15740_001 Banana nucleus 39.17 44.57
TraesCS3D01G280600.1 Wheat nucleus 31.53 41.08
GSMUA_Achr7P24790_001 Banana nucleus 26.11 39.23
GSMUA_Achr3P31860_001 Banana nucleus 39.49 38.27
TraesCS4D01G358900.1 Wheat nucleus 31.53 35.87
TraesCS7D01G367700.1 Wheat nucleus 28.66 33.96
GSMUA_Achr8P27820_001 Banana nucleus 37.26 32.23
CDX93024 Canola nucleus 29.94 30.72
KRH39283 Soybean nucleus 31.21 30.62
Bra015050.1-P Field mustard nucleus 29.62 30.1
Bra013253.1-P Field mustard nucleus 26.75 29.89
CDY50608 Canola nucleus 29.94 29.84
CDX77420 Canola nucleus 29.62 29.62
CDY39545 Canola nucleus 29.62 29.62
VIT_11s0016g03940.t01 Wine grape nucleus 30.89 29.48
AT3G24520.1 Thale cress nucleus 29.62 28.18
TraesCS4D01G276500.1 Wheat nucleus 30.25 27.86
CDY43158 Canola nucleus 27.07 27.78
TraesCS5D01G445100.1 Wheat nucleus 30.57 27.59
TraesCS1D01G382900.1 Wheat nucleus 31.53 27.2
TraesCS5D01G393200.1 Wheat nucleus 30.89 25.73
Solyc12g007070.1.1 Tomato nucleus 29.94 25.47
PGSC0003DMT400001025 Potato nucleus 29.62 25.27
TraesCS2D01G087400.1 Wheat nucleus 30.25 23.06
TraesCS4D01G239600.1 Wheat nucleus 25.8 21.09
TraesCS5D01G553300.1 Wheat nucleus 31.53 18.97
TraesCS2D01G211400.1 Wheat nucleus 29.62 18.64
TraesCS6D01G083800.1 Wheat nucleus 26.75 18.34
TraesCS3D01G289000.1 Wheat nucleus 22.93 17.31
CDY43157 Canola cytosol 0.96 3.33
Protein Annotations
Gene3D:1.10.10.10MapMan:15.5.13ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0043565InterPro:HSF_DNA-bdInterPro:HSF_famInterPro:IPR036388PFAM:PF00447PRINTS:PR00056
ScanProsite:PS00434PANTHER:PTHR10015PANTHER:PTHR10015:SF187SMART:SM00415SUPFAM:SSF46785EnsemblPlantsGene:TraesCS3D01G386000
EnsemblPlants:TraesCS3D01G386000.1InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg::
Description
No Description!
Coordinates
chr3D:+:501413268..501414380
Molecular Weight (calculated)
34760.4 Da
IEP (calculated)
5.437
GRAVY (calculated)
-0.342
Length
314 amino acids
Sequence
(BLAST)
001: MDGLHTELAL GLIGELETAP FVAKTYQLVS DPRTDAFVRW GRDNNSFLVT DVAGFSQLLL PCFFKHGNFS SFVRQLNSYG FRKVHPDRWE FAHESFLSGQ
101: KHLLPRIVRR KKKRGEASCS SLVGGGEQHV VANIGEEVEE EEDDEGREAL LEEVRRLRQE QTAIGEQLAR MSRRLQATEL RSDQLMPLLA RLDEDPNATS
201: LHLLQQAAEK KLQRMQLPSR DFASFPIVPP LHPAPSPLLA LGDTAMGGAR VGQWAESMPL KLPTFEEPSA SSGVQQVPEF EGGGRDSGSG MGITNSGTAV
301: EIPFPFCLLG QCFF
Best Arabidopsis Sequence Match ( AT2G26150.1 )
(BLAST)
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.