Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G394200.1 | Wheat | cytosol, mitochondrion, nucleus | 22.64 | 72.04 |
| TraesCS1D01G380700.1 | Wheat | cytosol | 67.23 | 57.18 |
| TraesCS1A01G373900.2 | Wheat | nucleus | 16.55 | 51.31 |
| TraesCS6A01G051100.1 | Wheat | nucleus | 16.22 | 25.67 |
| TraesCS2A01G007200.1 | Wheat | nucleus | 15.2 | 23.62 |
| Os04t0117200-01 | Rice | cytosol | 16.22 | 23.19 |
| Zm00001d039489_P002 | Maize | nucleus | 11.49 | 18.28 |
| EES02317 | Sorghum | cytosol | 11.82 | 17.46 |
| GSMUA_Achr8P19330_001 | Banana | nucleus | 11.32 | 16.14 |
| PGSC0003DMT400025536 | Potato | nucleus | 9.63 | 15.88 |
| Bra016482.1-P | Field mustard | nucleus | 8.78 | 15.76 |
| Solyc04g081450.2.1 | Tomato | nucleus | 9.46 | 15.6 |
| VIT_18s0001g14300.t01 | Wine grape | nucleus | 9.97 | 15.57 |
| AT1G19980.1 | Thale cress | nucleus | 8.78 | 15.2 |
| CDY62942 | Canola | nucleus | 8.45 | 15.15 |
| KRH36857 | Soybean | nucleus | 9.29 | 14.36 |
| KRH11849 | Soybean | nucleus | 9.29 | 14.36 |
| CDX83731 | Canola | nucleus | 8.45 | 14.29 |
| CDY43422 | Canola | nucleus | 7.77 | 14.15 |
| Bra012201.1-P | Field mustard | nucleus | 7.94 | 14.11 |
| OQU86794 | Sorghum | endoplasmic reticulum, nucleus, peroxisome, plastid | 11.66 | 12.85 |
| CDY57605 | Canola | nucleus | 4.56 | 12.33 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G374100.1 | EnsemblPlantsGene:TraesCS1A01G374100 | ncoils:Coil | PANTHER:PTHR35992 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:+:549603988..549608146
Molecular Weight (calculated)
64569.9 Da
IEP (calculated)
4.720
GRAVY (calculated)
-0.679
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGGGDDA GDGGRAEWQR IYDRVGALAA GRARLEARNR IQHEFWDARL HQAELSRSRW EVACRELLPS DDPKLAELLE SDLEDSRTCE ALLDTENSEL
101: LVQLREDGAC VELNENTADH EHTSGDLISE VRKLKRTYAT ICWNKDKEAT EAVQKLQQKI EELQVAACKK DDEIGILQAE ASACINKLML LKGKLDEMRS
201: LDKDIDIQKL KVGQHETLES KFASLPNNVE ELQVSVRYKD DEIGRLRAEA GPLKMKEVEV AQANKAAQKL QQNVEELQAA VRNKDDEIGK LRAEVEYLQQ
301: NVEELQVAVR NKDNKIGRLQ AEVRILNIKQ VEPAQKLQQN VDVLQIEVRN KDDENCRLPA EAANAEKKVP ALEVTHSTEP KTAEASASTK ALAVVVAASA
401: SPPVTSSKPG AGIDIDLTPP RLVGDREASP PFPPGFGPVA RFKDTTTTAP TATLAVVVAK EDGNPDQSIA GTTDDAGGLD IDTAPMPPAA TTTKTKSSML
501: KGKPRPKEQS KADKEGTELD SILGKRMERN RPESNVGLGE NEEMNRDMYK KMRGSVSGEA ESNIGVLGGK EATGIGATGE LMGAKDDAHQ EE
101: LVQLREDGAC VELNENTADH EHTSGDLISE VRKLKRTYAT ICWNKDKEAT EAVQKLQQKI EELQVAACKK DDEIGILQAE ASACINKLML LKGKLDEMRS
201: LDKDIDIQKL KVGQHETLES KFASLPNNVE ELQVSVRYKD DEIGRLRAEA GPLKMKEVEV AQANKAAQKL QQNVEELQAA VRNKDDEIGK LRAEVEYLQQ
301: NVEELQVAVR NKDNKIGRLQ AEVRILNIKQ VEPAQKLQQN VDVLQIEVRN KDDENCRLPA EAANAEKKVP ALEVTHSTEP KTAEASASTK ALAVVVAASA
401: SPPVTSSKPG AGIDIDLTPP RLVGDREASP PFPPGFGPVA RFKDTTTTAP TATLAVVVAK EDGNPDQSIA GTTDDAGGLD IDTAPMPPAA TTTKTKSSML
501: KGKPRPKEQS KADKEGTELD SILGKRMERN RPESNVGLGE NEEMNRDMYK KMRGSVSGEA ESNIGVLGGK EATGIGATGE LMGAKDDAHQ EE
001: MMQTGSGKTY TMGTGIKDGT KNGLIPQVMS ALFNKIDSVK HQMGFQLHVS FIEILKEEVL DLLDSSVPFN RLANGTPGKV VLSKSPVQIR ESPNGVITLS
101: GATEVPIATK EEMASCLEQG SLTRATGSTN MNNESSRSHA IFTITLEQMR KISSISVVKD TVDEDMGEEY CCAKLHLVDL AGSERAKRTG SGGVRLKEGI
201: HINRGLLALG NVISALGDEK RRKEGAHVPY RDSKLTRLLQ DSLGGNSKTV MIACISPADI NAEETLNTLK YANRARNIQN KPVANKDLIC SEMQKMRQEL
301: QYLQATLCAR GATSSEEVQV MREKIMKLES ANEELSRELH IYRSKRVTLD YCNIDAQEDG VIFSKDDGLK RGFESMDSDY EMSEATSGGI SEDIGAAEEW
401: EHALRQNSMG KELNELSKRL EEKESEMRVC GIGTETIRQH FEKKMMELEK EKRTVQDERD MLLAEVEELA ASSDRQAQVA RDNHAHKLKA LETQILNLKK
501: KQENQVEVLK QKQKSEDAAK RLKTEIQCIK AQKVQLQQKM KQEAEQFRQW KASQEKELLQ LKKEGRKTEH ERLKLEALNR RQKMVLQRKT EEAAMATKRL
601: KELLEARKSS PHDISVIANG QPPSRQTNEK SLRKWLDNEL EVMAKVHQVR FQYEKQIQVR AALAVELTSL RQEMEFPSNS HQEKNGQFRF LSPNTRLERI
701: ASLESMLDVS SNALTAMGSQ LSEAEEREHS LHAKPRWNHI QSMTDAKYLL QYVFDSTAEA RSKIWEKDRD IKEKKEQLND LLCLLQLTEV QNREILKEKK
801: TREQTVSIAL ASTSSSYSGS SRSSSKHYGD NNASDDPSSP SSTYHRATKH LKYTGPGIVN ISVRESEALL EETRKMKAMK KMGQSGKLWK WKRSHHQWLL
901: QFKWKWQKPW KLSEWIKQND ETTMHVMSKS HHDDEDDHSW NRHSMFQGA
101: GATEVPIATK EEMASCLEQG SLTRATGSTN MNNESSRSHA IFTITLEQMR KISSISVVKD TVDEDMGEEY CCAKLHLVDL AGSERAKRTG SGGVRLKEGI
201: HINRGLLALG NVISALGDEK RRKEGAHVPY RDSKLTRLLQ DSLGGNSKTV MIACISPADI NAEETLNTLK YANRARNIQN KPVANKDLIC SEMQKMRQEL
301: QYLQATLCAR GATSSEEVQV MREKIMKLES ANEELSRELH IYRSKRVTLD YCNIDAQEDG VIFSKDDGLK RGFESMDSDY EMSEATSGGI SEDIGAAEEW
401: EHALRQNSMG KELNELSKRL EEKESEMRVC GIGTETIRQH FEKKMMELEK EKRTVQDERD MLLAEVEELA ASSDRQAQVA RDNHAHKLKA LETQILNLKK
501: KQENQVEVLK QKQKSEDAAK RLKTEIQCIK AQKVQLQQKM KQEAEQFRQW KASQEKELLQ LKKEGRKTEH ERLKLEALNR RQKMVLQRKT EEAAMATKRL
601: KELLEARKSS PHDISVIANG QPPSRQTNEK SLRKWLDNEL EVMAKVHQVR FQYEKQIQVR AALAVELTSL RQEMEFPSNS HQEKNGQFRF LSPNTRLERI
701: ASLESMLDVS SNALTAMGSQ LSEAEEREHS LHAKPRWNHI QSMTDAKYLL QYVFDSTAEA RSKIWEKDRD IKEKKEQLND LLCLLQLTEV QNREILKEKK
801: TREQTVSIAL ASTSSSYSGS SRSSSKHYGD NNASDDPSSP SSTYHRATKH LKYTGPGIVN ISVRESEALL EETRKMKAMK KMGQSGKLWK WKRSHHQWLL
901: QFKWKWQKPW KLSEWIKQND ETTMHVMSKS HHDDEDDHSW NRHSMFQGA
Arabidopsis Description
KIN4BKinesin-like protein KIN-4B [Source:UniProtKB/Swiss-Prot;Acc:Q94LW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.