Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26150.1 | CDX83217 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | CDY21503 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | CDY27839 | AT5G52640.1 | 19366428 |
| AT2G26150.1 | CDY50297 | AT5G52640.1 | 19366428 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000557.1-P | Field mustard | nucleus | 92.23 | 98.85 |
| CDY21503 | Canola | nucleus | 89.28 | 95.42 |
| AT2G26150.1 | Thale cress | nucleus | 80.7 | 87.25 |
| KRH05436 | Soybean | nucleus | 50.4 | 52.96 |
| KRH15573 | Soybean | nucleus | 51.47 | 52.75 |
| KRH61515 | Soybean | nucleus | 51.47 | 51.61 |
| VIT_04s0008g01110.t01 | Wine grape | nucleus | 53.62 | 51.55 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 37.27 | 50.92 |
| PGSC0003DMT400021234 | Potato | nucleus | 46.92 | 49.58 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 39.14 | 46.65 |
| CDX95313 | Canola | nucleus | 31.37 | 43.66 |
| CDY29054 | Canola | nucleus | 30.29 | 42.64 |
| CDX90626 | Canola | nucleus | 30.56 | 42.38 |
| CDX90627 | Canola | nucleus | 31.9 | 41.46 |
| CDX94887 | Canola | nucleus | 29.22 | 40.37 |
| CDY14893 | Canola | nucleus | 27.88 | 39.69 |
| CDY43158 | Canola | nucleus | 31.9 | 38.89 |
| Os06t0565200-00 | Rice | nucleus | 34.05 | 38.37 |
| CDY11470 | Canola | nucleus | 29.22 | 38.25 |
| CDX76693 | Canola | nucleus | 28.95 | 37.89 |
| CDY10674 | Canola | nucleus | 39.14 | 37.53 |
| CDY10311 | Canola | nucleus | 38.07 | 36.6 |
| CDX94884 | Canola | nucleus | 28.15 | 36.59 |
| CDY34229 | Canola | nucleus | 36.73 | 36.15 |
| TraesCS7B01G267300.1 | Wheat | nucleus | 34.05 | 35.98 |
| CDY46606 | Canola | nucleus | 36.19 | 35.25 |
| CDY46607 | Canola | nucleus | 34.85 | 35.04 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 33.51 | 34.92 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 33.51 | 34.25 |
| CDX92958 | Canola | nucleus | 31.37 | 34.01 |
| Zm00001d046204_P001 | Maize | nucleus | 33.24 | 33.97 |
| Os01t0571300-01 | Rice | mitochondrion, nucleus | 34.58 | 32.09 |
| EES00942 | Sorghum | plastid | 32.98 | 31.22 |
| CDX78797 | Canola | nucleus | 35.66 | 30.93 |
| CDY50608 | Canola | nucleus | 25.74 | 30.48 |
| CDX93024 | Canola | nucleus | 24.93 | 30.39 |
| CDX77420 | Canola | nucleus | 25.47 | 30.25 |
| CDY60785 | Canola | nucleus | 35.39 | 30.21 |
| KXG20211 | Sorghum | nucleus | 33.51 | 29.98 |
| CDY39545 | Canola | nucleus | 25.2 | 29.94 |
| CDY13041 | Canola | nucleus | 24.4 | 29.64 |
| CDY38085 | Canola | nucleus | 34.05 | 28.93 |
| CDX85486 | Canola | nucleus | 34.05 | 28.73 |
| CDY58547 | Canola | nucleus | 34.85 | 28.63 |
| CDX92026 | Canola | nucleus | 33.78 | 28.12 |
| CDY23108 | Canola | nucleus | 25.47 | 27.94 |
| Zm00001d044259_P001 | Maize | plastid | 28.15 | 27.85 |
| CDY01288 | Canola | nucleus | 36.73 | 27.85 |
| CDX93842 | Canola | nucleus | 36.19 | 27.72 |
| CDX70290 | Canola | nucleus | 26.81 | 27.55 |
| CDX74228 | Canola | nucleus | 33.51 | 27.47 |
| CDY16977 | Canola | nucleus | 31.37 | 26.53 |
| CDY28731 | Canola | nucleus | 30.56 | 26.15 |
| CDX69418 | Canola | nucleus | 33.78 | 25.87 |
| CDY09259 | Canola | nucleus | 24.93 | 25.69 |
| CDY10361 | Canola | nucleus | 27.61 | 25.69 |
| CDX76506 | Canola | nucleus | 24.66 | 25.14 |
| CDX99415 | Canola | nucleus | 25.47 | 24.74 |
| CDY01562 | Canola | nucleus | 26.01 | 24.68 |
| CDY69818 | Canola | nucleus | 25.74 | 24.62 |
| CDY44649 | Canola | nucleus | 29.22 | 22.95 |
| CDY12723 | Canola | nucleus | 26.81 | 21.05 |
| CDY01180 | Canola | nucleus | 26.54 | 20.75 |
| CDX78902 | Canola | nucleus | 24.93 | 17.99 |
| CDY43157 | Canola | cytosol | 2.41 | 10.0 |
| CDX84097 | Canola | nucleus | 5.63 | 7.81 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078D280 | EnsemblPlants:CDX83217 | ProteinID:CDX83217 | ProteinID:CDX83217.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00138764001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE8454 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA03g22890D
Coordinates
chrLK031832:-:471619..473550
Molecular Weight (calculated)
41771.3 Da
IEP (calculated)
5.197
GRAVY (calculated)
-0.562
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSNSLLTL AQKQSQSFGL WIRNGQQLKV ELEEETVTYG GSAAASSSVG SSSSPRPMEG LNETGPPPFL TKTYDMVEDP ATDTVVSWSN GRNSFIVWDS
101: HKFSTTLLPR FFKHSNFSSF IRQLNTYGFR KIDPDRWEFA NEGFLAGQKH LLKSIKRRRN MGLQTVNQQG SGSGSGSGSG MSCVEVGQYG FEGEVERLKR
201: DHSVLVAEVV RLRQQQHNSK SQVAEMEQRL LVTEKRQQQM MAFLAKALNN PNFVQQFALM SKEKKGLFGS DVGRKRRLTS SPSLGTIEER VLHDHMEFDR
301: MKDDMETLLA AAIDDEASKD EQCLEAMNVM MEDGPLEPEI DVKVEDLVAS PLDWGSEDLH DIVDQMGFLG SEP
101: HKFSTTLLPR FFKHSNFSSF IRQLNTYGFR KIDPDRWEFA NEGFLAGQKH LLKSIKRRRN MGLQTVNQQG SGSGSGSGSG MSCVEVGQYG FEGEVERLKR
201: DHSVLVAEVV RLRQQQHNSK SQVAEMEQRL LVTEKRQQQM MAFLAKALNN PNFVQQFALM SKEKKGLFGS DVGRKRRLTS SPSLGTIEER VLHDHMEFDR
301: MKDDMETLLA AAIDDEASKD EQCLEAMNVM MEDGPLEPEI DVKVEDLVAS PLDWGSEDLH DIVDQMGFLG SEP
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.