Factsheet for Zm00001d044259_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d024903_P001
Zm00001d044259_P001
Zm00001d046204_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	Zm00001d044259_P001	AT2G26150.1	21510947
AT2G26150.1	Zm00001d046204_P001	AT2G26150.1	21510947
AT2G26150.1	Zm00001d024903_P001	AT5G52640.1	19366428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00942	Sorghum	plastid	81.43	77.92
Os01t0571300-01	Rice	mitochondrion, nucleus	56.76	53.23
GSMUA_Achr2P16660_001	Banana	nucleus	23.08	31.87
AT2G26150.1	Thale cress	nucleus	27.85	30.43
Bra000557.1-P	Field mustard	nucleus	27.32	29.6
CDY21503	Canola	nucleus	27.32	29.51
Zm00001d032923_P002	Maize	nucleus	27.85	29.41
Zm00001d016255_P001	Maize	nucleus	19.89	29.18
GSMUA_Achr6P00960_001	Banana	nucleus	23.87	28.75
Zm00001d043536_P001	Maize	nucleus	18.83	28.51
CDX83217	Canola	nucleus	27.85	28.15
VIT_04s0008g01110.t01	Wine grape	nucleus	28.65	27.84
PGSC0003DMT400021234	Potato	nucleus	25.99	27.76
Zm00001d033987_P001	Maize	nucleus	26.79	27.22
Zm00001d018941_P001	Maize	nucleus	27.06	27.2
KRH05436	Soybean	nucleus	25.2	26.76
KRH61515	Soybean	nucleus	26.26	26.61
Zm00001d046299_P001	Maize	nucleus	18.3	25.84
KRH15573	Soybean	nucleus	24.67	25.55
Zm00001d046204_P001	Maize	nucleus	24.67	25.48
Zm00001d027757_P001	Maize	nucleus	25.2	24.74
Zm00001d048041_P004	Maize	nucleus	26.79	22.35
Zm00001d044168_P001	Maize	nucleus	18.57	21.15
Zm00001d034886_P001	Maize	nucleus	25.73	18.41
Zm00001d016674_P001	Maize	nucleus	24.4	18.11
Zm00001d012749_P001	Maize	nucleus	20.69	18.01
Zm00001d011406_P001	Maize	nucleus	18.04	17.57
Zm00001d038746_P001	Maize	nucleus	21.75	17.48
Zm00001d012823_P001	Maize	nucleus	24.67	16.73
Zm00001d010812_P001	Maize	nucleus	19.89	16.7
Zm00001d016520_P001	Maize	nucleus	23.08	16.48
Zm00001d034433_P003	Maize	nucleus	26.26	15.94

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	UniProt:A0A1D6NJY6	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	ProteinID:ONM40562.1
PFAM:PF00447	PRINTS:PR00056	PANTHER:PTHR10015	PANTHER:PTHR10015:SF195	SMART:SM00415	SUPFAM:SSF46785
UniParc:UPI0008434D02	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d044259	EnsemblPlants:Zm00001d044259_P001	EnsemblPlants:Zm00001d044259_T001
SEG:seg	:	:	:	:	:

Description

HSF-transcription factor 3HSF transcription factor

Coordinates

chr3:+:223146310..223151904

Molecular Weight (calculated)

41041.1 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.446

Length

377 amino acids

Sequence
(BLAST)

001: MASSSSCPLA PGTSGCKPRT TRTSGVGFGV EAMARSVAAV KLEPKPEPWA AEAEEGSSVV PRSMEGPPFP APFVAKTYEM VSDAATDAVV SWAPCGAGNT
101: FVVWDPQALA TGILPRFFKH ANFASFVRQL NVYVRQKHLL KSIRRRRASK PQVEASPRNS ASACSGQPNK DPGVVESLKR DRAALRAEVI TLRQQYSICK
201: SQLVALEERI LNNERDQQKA IAFFAKVLSN PAFVQQVLRN YARERELHGA SKRQRLMENE GHRQGDLPLR GSTEAAFATG AAGVSVGTGS TNVGTAARQE
301: ESGSELNDQE VNSIWSDVWD ELDLDLDAVP GAEMDRREAD KGVAGFHDVE DLSGRPCGWG DEFSYLAEPM QFVEHYD

Best Arabidopsis Sequence Match ( AT2G26150.1 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.