Factsheet for Zm00001d038746_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010812_P001	Maize	nucleus	75.27	78.62
EES18551	Sorghum	nucleus	76.97	75.84
HORVU1Hr1G081300.1	Barley	nucleus	53.73	58.47
TraesCS1A01G350400.2	Wheat	nucleus	54.37	57.56
Os05t0530400-01	Rice	nucleus	56.29	57.52
GSMUA_Achr8P27750_001	Banana	nucleus	21.96	46.61
VIT_10s0003g01770.t01	Wine grape	nucleus	31.34	42.36
GSMUA_Achr3P15640_001	Banana	nucleus	40.3	41.72
CDY13041	Canola	nucleus	27.29	41.69
VIT_12s0028g01410.t01	Wine grape	nucleus	31.77	40.38
AT5G45710.3	Thale cress	nucleus	29.64	40.29
KRH11063	Soybean	nucleus	33.48	40.05
CDY09259	Canola	nucleus	30.49	39.5
KRH21206	Soybean	nucleus	32.62	39.03
Bra017595.1-P	Field mustard	nucleus	28.14	38.82
CDX99415	Canola	nucleus	31.56	38.54
CDX76506	Canola	nucleus	30.06	38.52
CDY23108	Canola	nucleus	27.72	38.24
CDY69818	Canola	nucleus	31.77	38.21
Bra012571.1-P	Field mustard	nucleus	31.77	38.21
CDY01562	Canola	nucleus	31.77	37.91
KRH42919	Soybean	nucleus	32.41	37.81
KRH59030	Soybean	nucleus	32.41	37.81
Zm00001d012749_P001	Maize	nucleus	34.33	37.18
AT4G18880.1	Thale cress	nucleus	31.56	36.91
Solyc02g072000.2.1	Tomato	nucleus	31.98	36.76
Bra020988.1-P	Field mustard	nucleus	27.29	36.68
Solyc07g055710.2.1	Tomato	nucleus	30.06	36.34
GSMUA_Achr6P31750_001	Banana	nucleus	37.53	36.21
PGSC0003DMT400044683	Potato	nucleus	31.34	35.68
PGSC0003DMT400071487	Potato	nucleus	30.28	35.24
Solyc03g006000.2.1	Tomato	nucleus	30.06	35.16
Zm00001d046299_P001	Maize	nucleus	18.12	31.84
Zm00001d016255_P001	Maize	nucleus	16.84	30.74
Zm00001d043536_P001	Maize	nucleus	15.99	30.12
Zm00001d032923_P002	Maize	nucleus	22.6	29.69
Zm00001d044168_P001	Maize	nucleus	19.62	27.79
Zm00001d027757_P001	Maize	nucleus	22.39	27.34
Zm00001d018941_P001	Maize	nucleus	21.54	26.93
Zm00001d016520_P001	Maize	nucleus	30.28	26.89
CDX78902	Canola	nucleus	29.0	26.31
Bra013358.1-P	Field mustard	nucleus	29.0	26.31
Zm00001d033987_P001	Maize	nucleus	20.47	25.88
Zm00001d046204_P001	Maize	nucleus	18.98	24.38
Zm00001d034886_P001	Maize	nucleus	27.29	24.29
Zm00001d012823_P001	Maize	nucleus	26.87	22.66
Zm00001d011406_P001	Maize	nucleus	18.34	22.22
Zm00001d048041_P004	Maize	nucleus	21.11	21.9
Zm00001d044259_P001	Maize	plastid	17.48	21.75
Zm00001d016674_P001	Maize	nucleus	23.45	21.65
Zm00001d034433_P003	Maize	nucleus	21.96	16.59

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:103630625	MapMan:15.5.13	UniProt:A0A1D6MA83	ProteinID:AQK87703.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002211A02	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d038746
EnsemblPlants:Zm00001d038746_P001	EnsemblPlants:Zm00001d038746_T001	SEG:seg	:	:	:

Description

HSF-transcription factor 15Heat stress transcription factor A-4a

Coordinates

chr6:-:163786743..163788401

Molecular Weight (calculated)

51626.6 Da

IEP (calculated)

5.349

GRAVY (calculated)

-0.533

Length

469 amino acids

Sequence
(BLAST)

001: MEGSNSNSHG GAGGGGGGSS SPTPFLVKTY EMVEDPATIH VVSWGPGGAS FVVWNPPDLS RDLLPKYFKH SNFSSFIRQL NTYGFRKINP ERWEFANDDF
101: IRGHKHLLKR IHRRKPVHSH SLRTQASGPL AESQRRELED EISRLRYEKS LLLADLQRQN QQQRGISWQM QSLESRLAQM EERQRSVVAS LCDILQRRGV
201: VRVPASALET TDHSSKKRRV PIPKTDLFVA GEQPKVEEQQ VLPFLQAVGA EAPGVSPIRV LDAEPFQKME LALVSLEDFF QRAAPPAPAL EMCTGAAAAA
301: AEPSPPLTLG EMLSVPAPVD TNIDLQLQSS ACQNPFASTS GRDQMSSPLA EPPSYAQSPM LLPMAQLHGY DYRAAQVDMC SDTTTGDTSQ DETTSETGGS
401: HGPAKVNDVF WERFLTDAEG KSEAIEAKED VKAAVDRSCL RLHDNVDRIT EQMGQLDSAE NDSYAIQNC

Best Arabidopsis Sequence Match ( AT5G45710.1 )
(BLAST)

001: MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV RGRPYLMKNI
101: HRRKPVHSHS LVNLQAQNPL TESERRSMED QIERLKNEKE GLLAELQNQE QERKEFELQV TTLKDRLQHM EQHQKSIVAY VSQVLGKPGL SLNLENHERR
201: KRRFQENSLP PSSSHIEQVE KLESSLTFWE NLVSESCEKS GLQSSSMDHD AAESSLSIGD TRPKSSKIDM NSEPPVTVTA PAPKTGVNDD FWEQCLTENP
301: GSTEQQEVQS ERRDVGNDNN GNKIGNQRTY WWNSGNVNNI TEKAS

Arabidopsis Description

HSFA4CRHA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.