Factsheet for HORVU1Hr1G081300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G350400.2	Wheat	nucleus	78.42	76.3
Zm00001d010812_P001	Maize	nucleus	60.09	57.68
Os05t0530400-01	Rice	nucleus	60.56	56.86
EES18551	Sorghum	nucleus	61.72	55.88
Zm00001d038746_P001	Maize	nucleus	58.47	53.73
GSMUA_Achr8P27750_001	Banana	nucleus	25.75	50.23
HORVU7Hr1G034320.1	Barley	nucleus, plastid	14.15	45.52
VIT_10s0003g01770.t01	Wine grape	nucleus	35.03	43.52
CDY13041	Canola	nucleus	30.63	43.0
AT5G45710.3	Thale cress	nucleus	33.64	42.03
CDY09259	Canola	nucleus	34.34	40.88
VIT_12s0028g01410.t01	Wine grape	nucleus	34.8	40.65
CDX76506	Canola	nucleus	34.34	40.44
Bra017595.1-P	Field mustard	nucleus	31.79	40.29
KRH21206	Soybean	nucleus	36.43	40.05
KRH11063	Soybean	nucleus	36.19	39.8
CDY23108	Canola	nucleus	31.32	39.71
Bra020988.1-P	Field mustard	nucleus	32.02	39.54
GSMUA_Achr3P15640_001	Banana	nucleus	41.53	39.51
HORVU3Hr1G071550.3	Barley	nucleus	39.44	39.35
KRH42919	Soybean	nucleus	36.66	39.3
KRH59030	Soybean	nucleus	36.19	38.81
CDY69818	Canola	nucleus	35.03	38.72
Bra012571.1-P	Field mustard	nucleus	35.03	38.72
HORVU7Hr1G055320.1	Barley	mitochondrion, nucleus	14.39	38.27
Solyc02g072000.2.1	Tomato	nucleus	36.19	38.24
CDY01562	Canola	nucleus	34.8	38.17
Solyc07g055710.2.1	Tomato	nucleus	34.34	38.14
CDX99415	Canola	nucleus	33.87	38.02
AT4G18880.1	Thale cress	nucleus	35.27	37.91
PGSC0003DMT400044683	Potato	nucleus	35.5	37.14
Solyc03g006000.2.1	Tomato	nucleus	33.18	35.66
GSMUA_Achr6P31750_001	Banana	nucleus	40.14	35.6
PGSC0003DMT400071487	Potato	nucleus	33.18	35.48
HORVU2Hr1G043030.1	Barley	nucleus	11.14	30.97
HORVU4Hr1G073650.2	Barley	nucleus	24.59	30.81
HORVU1Hr1G083420.2	Barley	nucleus	26.22	30.38
HORVU7Hr1G088920.3	Barley	nucleus	18.33	29.7
HORVU6Hr1G017910.1	Barley	nucleus	31.32	29.54
HORVU2Hr1G014590.1	Barley	nucleus	27.15	27.99
HORVU7Hr1G119990.1	Barley	nucleus	15.78	27.98
HORVU3Hr1G088890.2	Barley	nucleus	18.33	27.34
HORVU3Hr1G055960.1	Barley	nucleus	19.95	26.3
HORVU5Hr1G094380.1	Barley	nucleus	22.51	26.15
HORVU4Hr1G090090.4	Barley	nucleus, plastid	17.87	25.93
CDX78902	Canola	nucleus	30.39	25.34
Bra013358.1-P	Field mustard	nucleus	30.39	25.34
HORVU4Hr1G090850.1	Barley	nucleus	19.03	24.4
HORVU7Hr1G087690.1	Barley	nucleus	20.19	23.84
HORVU5Hr1G123770.1	Barley	nucleus	30.39	22.82
HORVU0Hr1G008940.2	Barley	cytosol, nucleus	14.62	21.5
HORVU5Hr1G105770.2	Barley	nucleus	24.59	20.35
HORVU3Hr1G069590.4	Barley	nucleus, plastid	10.44	18.99

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EMBL:AK362315	ncoils:Coil	UniProt:F2DEJ8	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G081300	EnsemblPlants:HORVU1Hr1G081300.1	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF154	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002006015	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DEJ8]

Coordinates

chrchr1H:+:527443694..527446076

Molecular Weight (calculated)

48729.4 Da

IEP (calculated)

5.331

GRAVY (calculated)

-0.666

Length

431 amino acids

Sequence
(BLAST)

001: MEMEGGSQGA SPAPFLIKTY EMVEDPATSR VVSWGPGGAS FVVWNPPDFS RDLLPKYFKH NNFSSFIRQL NTYGFRKIDP ERWEFANDDF IRGHMHLLKN
101: IHRRKPVHSH SLQNQVNGPL AESERREYED EISRLKHENS LLVAELQKQA HQQCGIGWLM QSLEDRLMVM EQRQTDVVSS VRDILQRRRG AHHPGQQTML
201: ELEPTDRFSK KRRVPKIDLF VEEQRVPYPR AIGDETPGMI QVNAEPFEKM EMALVSLEKL VQRAAAATPT PSTDDPALGD LQAAPMEAGV NLELSPPNIR
301: HVHSPPELAV AESPGYAVQS PMLLFPDIQQ DKHKTMSEAD LSSEASTTDT SQDETTAETG VPREPAVAAN DLFWERFLVD TPKPQCGYAF QESHESKDDV
401: KIGIDCNWYG HRDNVDQITQ QMGHLASAQK T

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.