Factsheet for HORVU0Hr1G008940.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G239700.1	Wheat	nucleus	89.76	68.49
TraesCS4A01G062800.1	Wheat	nucleus	89.08	68.15
TraesCS4D01G239600.1	Wheat	nucleus	88.05	67.19
Os03t0224700-01	Rice	nucleus	66.89	47.8
EER95242	Sorghum	nucleus	66.21	46.75
Zm00001d048041_P004	Maize	nucleus	64.16	41.59
HORVU2Hr1G043030.1	Barley	nucleus	12.29	23.23
GSMUA_Achr2P21640_001	Banana	nucleus	25.26	22.29
HORVU4Hr1G073650.2	Barley	nucleus	24.91	21.22
HORVU1Hr1G083420.2	Barley	nucleus	25.94	20.43
HORVU7Hr1G119990.1	Barley	nucleus	16.38	19.75
HORVU5Hr1G094380.1	Barley	nucleus	24.91	19.68
HORVU7Hr1G055320.1	Barley	mitochondrion, nucleus	10.58	19.14
HORVU3Hr1G069590.4	Barley	nucleus, plastid	15.02	18.57
HORVU7Hr1G034320.1	Barley	nucleus, plastid	8.19	17.91
HORVU2Hr1G014590.1	Barley	nucleus	25.26	17.7
HORVU7Hr1G088920.3	Barley	nucleus	16.04	17.67
HORVU3Hr1G088890.2	Barley	nucleus	16.04	16.26
HORVU4Hr1G090090.4	Barley	nucleus, plastid	16.38	16.16
HORVU5Hr1G105770.2	Barley	nucleus	27.99	15.74
HORVU5Hr1G123770.1	Barley	nucleus	30.72	15.68
HORVU3Hr1G055960.1	Barley	nucleus	17.41	15.6
HORVU4Hr1G090850.1	Barley	nucleus	17.06	14.88
HORVU1Hr1G081300.1	Barley	nucleus	21.5	14.62
HORVU7Hr1G087690.1	Barley	nucleus	18.09	14.52
HORVU6Hr1G017910.1	Barley	nucleus	21.16	13.57
HORVU3Hr1G071550.3	Barley	nucleus	18.09	12.27

Protein Annotations

MapMan:15.5.13	UniProt:A0A287DY54	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EnsemblPlantsGene:HORVU0Hr1G008940	EnsemblPlants:HORVU0Hr1G008940.2	InterPro:HSF_fam	PANTHER:PTHR10015	PANTHER:PTHR10015:SF175	UniParc:UPI000B469FC8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:53506162..53507446

Molecular Weight (calculated)

33519.3 Da

IEP (calculated)

4.674

GRAVY (calculated)

-0.843

Length

293 amino acids

Sequence
(BLAST)

001: SWLHGFRKVD PDRWEWANEG FLRGQKHLLK IIKRKKRPQE ASRELEKAPV KASPGTENIE IGRYGGLVKE VETLKRDKAL LMQQLVDLRH YQQSSNLEVQ
101: SLIQRLQLME QNQKQMMALL AIVVQNPSLL NQLVQQQQQQ RRNSWRYEDG NKKRRFPALE QGPVTDQETS GAGAEIIQYR PPVPETSSQV IADEAYLSAT
201: AEPISSPPLN MPMDIDTETT SDNLNTQGSS GDIFADMPAL PDFDDMQLWF GEDGELTLTI QDYDESPQSE QDCQMEAQHN HNNPQYGAQV EFR

Best Arabidopsis Sequence Match ( AT1G32330.2 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.