Factsheet for Os03t0224700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95242	Sorghum	nucleus	70.73	69.88
TraesCS4A01G062800.1	Wheat	nucleus	62.93	67.36
TraesCS4D01G239600.1	Wheat	nucleus	62.68	66.93
HORVU0Hr1G008940.2	Barley	cytosol, nucleus	47.8	66.89
TraesCS4B01G239700.1	Wheat	nucleus	62.44	66.67
Zm00001d048041_P004	Maize	nucleus	70.0	63.5
Os07t0178600-01	Rice	nucleus	31.22	34.41
Os10t0419300-00	Rice	nucleus	29.76	34.08
GSMUA_Achr2P21640_001	Banana	nucleus	26.59	32.83
Os03t0161900-02	Rice	nucleus	29.51	31.93
Os02t0232000-01	Rice	nucleus	22.68	31.21
Os01t0733200-01	Rice	nucleus	18.78	30.8
Os06t0565200-00	Rice	nucleus	23.66	29.31
Os01t0571300-01	Rice	mitochondrion, nucleus	27.56	28.11
Os03t0854500-01	Rice	nucleus	33.17	26.88
Os01t0625300-01	Rice	nucleus	20.0	24.19
Os02t0527300-01	Rice	nucleus	27.56	22.69
Os02t0496100-01	Rice	nucleus	25.37	21.89
Os01t0749300-02	Rice	nucleus	23.17	21.59
Os05t0530400-01	Rice	nucleus	24.15	21.57

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:4332113	ProteinID:AAN52741.1	ProteinID:ABF94729.1	ProteinID:ABF94730.1
EMBL:AJ575240	EMBL:AK072571	EMBL:AY344490	ProteinID:BAF11343.1	ProteinID:BAS83045.1	ncoils:Coil
ProteinID:EAZ26118.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	EnsemblPlantsGene:Os03g0224700	EnsemblPlants:Os03t0224700-01
PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF175	UniProt:Q10PR4
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0000DB453C	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015633341.1
SEG:seg	:	:	:	:	:

Description

HEAT STRESS TRANSCRIPTION FACTOR A9Similar to HSP protein (Fragment). (Os03t0224700-01)

Coordinates

chr3:+:6537573..6541381

Molecular Weight (calculated)

45468.1 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.676

Length

410 amino acids

Sequence
(BLAST)

001: MGSKKRSPQH PAAAAPPPAV GGGGGGEVSG DGGASTANGP VVPKPSEVAP FLTKVYDMVS DPATDNVISW AEGGGSFVIW DSHAFERDLH RHFKHSNFTS
101: FIRQLNTYGF RKVHPDRWEW ANEGFIMGQK HLLKTIKRRK KSSQESPSEI QKAPVKTAPG TENIEIGKYG GLEKEVETLK RDKALLMQQL VDLRHYQQTS
201: NLEVQNLIER LQVMEQNQQQ MMALLAIVVQ NPSFLNQLVQ QQQQQRRSNW WSPDGSKKRR FHALEQGPVT DQETSGRGAH IVEYLPPVPE TSGQVNPVEG
301: AICSANSQPV PSPAVATPMD MQTSNVADTL GSSEEPFADN STLHEWDDND MQLLFDDNLD PILPPFENDG QMGPPLSVQD YDFPQLEQDC LMEAQYNSNN
401: PQYADVITEA

Best Arabidopsis Sequence Match ( AT1G32330.1 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.