Factsheet for Os05t0530400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G081300.1	Barley	nucleus	56.86	60.56
Zm00001d010812_P001	Maize	nucleus	58.82	60.13
EES18551	Sorghum	nucleus	60.13	57.98
TraesCS1A01G350400.2	Wheat	nucleus	55.77	57.79
Zm00001d038746_P001	Maize	nucleus	57.52	56.29
GSMUA_Achr8P27750_001	Banana	nucleus	24.62	51.13
VIT_10s0003g01770.t01	Wine grape	nucleus	33.99	44.96
CDY13041	Canola	nucleus	29.63	44.3
VIT_12s0028g01410.t01	Wine grape	nucleus	35.08	43.63
AT5G45710.3	Thale cress	nucleus	32.03	42.61
Bra017595.1-P	Field mustard	nucleus	30.72	41.47
KRH21206	Soybean	nucleus	35.29	41.33
GSMUA_Achr3P15640_001	Banana	nucleus	40.74	41.28
CDY09259	Canola	nucleus	32.24	40.88
CDY23108	Canola	nucleus	30.28	40.88
KRH11063	Soybean	nucleus	34.86	40.82
Os01t0749300-02	Rice	nucleus	38.56	40.23
CDX76506	Canola	nucleus	32.03	40.16
KRH42919	Soybean	nucleus	34.64	39.55
Solyc02g072000.2.1	Tomato	nucleus	34.86	39.22
CDX99415	Canola	nucleus	32.46	38.8
Bra020988.1-P	Field mustard	nucleus	29.41	38.68
AT4G18880.1	Thale cress	nucleus	33.55	38.4
KRH59030	Soybean	nucleus	33.55	38.31
PGSC0003DMT400071487	Potato	nucleus	33.55	38.21
Bra012571.1-P	Field mustard	nucleus	32.46	38.21
CDY69818	Canola	nucleus	32.46	38.21
CDY01562	Canola	nucleus	32.68	38.17
Solyc03g006000.2.1	Tomato	nucleus	33.33	38.15
Solyc07g055710.2.1	Tomato	nucleus	31.81	37.63
PGSC0003DMT400044683	Potato	nucleus	33.77	37.62
GSMUA_Achr6P31750_001	Banana	nucleus	38.13	36.01
Os10t0419300-00	Rice	nucleus	27.02	34.64
Os01t0733200-01	Rice	nucleus	18.74	34.4
Os03t0161900-02	Rice	nucleus	26.58	32.19
Os07t0178600-01	Rice	nucleus	25.27	31.18
Os02t0496100-01	Rice	nucleus	32.24	31.16
Os06t0565200-00	Rice	nucleus	21.57	29.91
Os02t0232000-01	Rice	nucleus	18.95	29.19
Os03t0854500-01	Rice	nucleus	30.72	27.87
Os01t0625300-01	Rice	nucleus	20.26	27.43
Bra013358.1-P	Field mustard	nucleus	30.5	27.08
CDX78902	Canola	nucleus	30.5	27.08
Os01t0571300-01	Rice	mitochondrion, nucleus	23.09	26.37
Os03t0224700-01	Rice	nucleus	21.57	24.15
Os02t0527300-01	Rice	nucleus	25.05	23.09

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:4339409	ProteinID:AAS72351.1	ProteinID:AAY33578.1	ProteinID:AAY33579.1
ProteinID:AAY33580.1	ProteinID:AAY33581.1	ProteinID:AAY33582.1	ProteinID:AAY33583.1	ProteinID:AAY33584.1	EMBL:AB050096
EMBL:AB050098	ProteinID:ABD15811.1	ProteinID:ABD15812.1	ProteinID:ABD15813.1	ProteinID:ABD15814.1	EMBL:AK100412
EMBL:AY344492	ProteinID:BAB71737.1	ProteinID:BAB71739.1	ProteinID:BAF18041.1	ProteinID:BAS95027.1	ncoils:Coil
ProteinID:EAZ35034.1	ProteinID:EEE64456.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	EnsemblPlantsGene:Os05g0530400	EnsemblPlants:Os05t0530400-01
PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154	UniProt:Q93VB5
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00000A14E9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015639851.1
SEG:seg	:	:	:	:	:

Description

RICE SQUAMOSA PROMOTER-BINDING-LIKE 7Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10). (Os05t0530400-01)

Coordinates

chr5:+:26344418..26346857

Molecular Weight (calculated)

51166.7 Da

IEP (calculated)

4.948

GRAVY (calculated)

-0.645

Length

459 amino acids

Sequence
(BLAST)

001: MESSNLGGGG GGGGGGGPPP FLIKTYEMVE DAATNHVVSW GPGGASFVVW NPLDFSRDLL PKYFKHNNFS SFIRQLNTYG FRKIDPERWE FANEDFIRGH
101: THLLKNIHRR KPVHSHSLQN QINGPLAESE RRELEEEINR LKYEKSILVA DLQRQNQQQY VINWQMQAME GRLVAMEQRQ KNIVASLCEM LQRRGGAVSS
201: SLLESDHFSK KRRVPKMDLF VDDCAAGEEQ KVFQFQGIGT DAPAMPPVLP VTNGEAFDRV ELSLVSLEKL FQRANDACTA AEEMYSHGHG GTEPSTAICP
301: EEMNTAPMET GIDLQLPASL HPSSPNTGNA HLHLSTELTE SPGFVQSPEL PMAEIREDIH VTRYPTQADV NSEIASSTDT SQDGTSETEA SHGPTNDVFW
401: ERFLTETPRS CLDESERQES PKDDVKAELG CNGFHHREKV DQITEQMGHL ASAEQTLHT

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.