Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01562 | Canola | nucleus | 81.55 | 83.21 |
| CDY09259 | Canola | nucleus | 75.06 | 83.15 |
| CDX76506 | Canola | nucleus | 75.81 | 83.06 |
| CDY69818 | Canola | nucleus | 80.55 | 82.82 |
| Bra012571.1-P | Field mustard | nucleus | 80.55 | 82.82 |
| CDX99415 | Canola | nucleus | 79.3 | 82.81 |
| Bra020988.1-P | Field mustard | nucleus | 71.82 | 82.52 |
| AT5G45710.3 | Thale cress | nucleus | 55.36 | 64.35 |
| CDX78902 | Canola | nucleus | 75.56 | 58.61 |
| Bra013358.1-P | Field mustard | nucleus | 75.56 | 58.61 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 48.63 | 56.2 |
| KRH42919 | Soybean | nucleus | 53.87 | 53.73 |
| KRH11063 | Soybean | nucleus | 52.37 | 53.57 |
| KRH21206 | Soybean | nucleus | 52.12 | 53.32 |
| KRH59030 | Soybean | nucleus | 52.62 | 52.49 |
| Solyc03g006000.2.1 | Tomato | nucleus | 48.13 | 48.13 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 26.43 | 47.96 |
| PGSC0003DMT400071487 | Potato | nucleus | 48.13 | 47.89 |
| Solyc02g072000.2.1 | Tomato | nucleus | 47.88 | 47.06 |
| Zm00001d012749_P001 | Maize | nucleus | 42.64 | 39.49 |
| EES01479 | Sorghum | nucleus | 42.39 | 39.17 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 41.65 | 38.66 |
| Os01t0749300-02 | Rice | nucleus | 42.39 | 38.64 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 41.15 | 38.19 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 41.4 | 37.64 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 37.91 | 36.54 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 40.9 | 36.2 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 43.14 | 35.6 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 37.91 | 35.27 |
| Zm00001d010812_P001 | Maize | nucleus | 38.65 | 34.52 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 37.91 | 34.31 |
| EES18551 | Sorghum | nucleus | 39.9 | 33.61 |
| Os05t0530400-01 | Rice | nucleus | 38.4 | 33.55 |
| AT3G51910.1 | Thale cress | nucleus | 22.69 | 33.46 |
| AT5G43840.1 | Thale cress | nucleus | 22.44 | 31.91 |
| Zm00001d038746_P001 | Maize | nucleus | 36.91 | 31.56 |
| AT3G63350.1 | Thale cress | nucleus | 21.7 | 30.85 |
| AT2G26150.1 | Thale cress | nucleus | 24.94 | 28.99 |
| AT4G13980.1 | Thale cress | nucleus | 32.67 | 28.11 |
| AT3G22830.1 | Thale cress | nucleus | 27.43 | 27.09 |
| AT3G02990.1 | Thale cress | nucleus | 31.17 | 26.71 |
| AT3G24520.1 | Thale cress | nucleus | 20.7 | 25.15 |
| AT5G16820.2 | Thale cress | nucleus | 29.68 | 24.74 |
| AT5G03720.1 | Thale cress | nucleus | 23.94 | 23.3 |
| AT5G54070.1 | Thale cress | nucleus | 19.2 | 23.26 |
| AT4G17750.1 | Thale cress | nucleus | 28.43 | 23.03 |
| AT1G32330.1 | Thale cress | nucleus | 27.68 | 22.89 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:827622 | UniProt:A0A178UUP9 | ProteinID:AEE84101.1 | Symbol:AT-HSFA4A |
| ArrayExpress:AT4G18880 | EnsemblPlantsGene:AT4G18880 | RefSeq:AT4G18880 | TAIR:AT4G18880 | RefSeq:AT4G18880-TAIR-G | EnsemblPlants:AT4G18880.1 |
| TAIR:AT4G18880.1 | EMBL:AY125512 | EMBL:BT001049 | ProteinID:CAA16745.1 | ProteinID:CAB78890.1 | ncoils:Coil |
| GO:GO:0000302 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0042803 | GO:GO:0043565 |
| GO:GO:0045893 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | RefSeq:NP_193623.1 | UniProt:O49403 |
| ProteinID:OAO96572.1 | PFAM:PF00447 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00056 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF154 |
| SMART:SM00415 | SUPFAM:SSF46785 | SUPFAM:SSF58113 | EMBL:U68561 | UniParc:UPI00000AC4BA | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
Coordinates
chr4:-:10347479..10349902
Molecular Weight (calculated)
46247.0 Da
IEP (calculated)
5.168
GRAVY (calculated)
-0.876
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.