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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01704 Sorghum cytosol 94.92 95.96
Zm00001d012457_P003 Maize cytosol 92.2 94.78
TraesCS3D01G345500.1 Wheat cytosol 92.92 94.29
TraesCS3A01G351300.1 Wheat cytosol 93.1 93.78
HORVU3Hr1G087600.1 Barley cytosol, plastid 90.38 93.61
TraesCS3B01G383800.1 Wheat cytosol 92.01 93.54
Os05t0467000-01 Rice cytosol, plasma membrane 92.38 93.05
GSMUA_AchrUn_... Banana cytosol 79.49 84.72
VIT_08s0105g00390.t01 Wine grape cytosol 80.76 84.44
KRH00256 Soybean cytosol 73.32 84.17
GSMUA_Achr5P29340_001 Banana cytosol 80.4 83.9
GSMUA_Achr8P02740_001 Banana cytosol 78.58 83.59
KRH49392 Soybean cytosol 80.58 83.3
Bra006881.1-P Field mustard cytosol 77.86 81.25
Solyc09g005550.2.1 Tomato cytosol 77.86 81.1
CDX73684 Canola cytosol 77.68 81.06
AT3G51850.1 Thale cress cytosol 77.5 80.87
CDX78044 Canola cytosol, nucleus, plasma membrane 77.5 80.87
CDY29049 Canola cytosol 77.31 80.68
Bra033476.1-P Field mustard cytosol 77.31 80.68
CDY23165 Canola cytosol 77.31 80.68
CDX95303 Canola cytosol 77.31 80.68
Bra012835.1-P Field mustard cytosol 77.13 80.49
CDX90631 Canola cytosol 77.13 80.34
GSMUA_Achr4P18940_001 Banana cytosol 69.15 71.48
Os07t0568600-01 Rice cytosol, plasma membrane 64.25 64.36
Os03t0808600-01 Rice plasma membrane 61.89 63.38
Os03t0688300-01 Rice plasma membrane 62.79 60.28
Os12t0230200-02 Rice plasma membrane 58.26 57.02
Os08t0540400-01 Rice plasma membrane 55.54 54.16
Os09t0514200-01 Rice mitochondrion 53.9 51.47
Os02t0685900-00 Rice plasma membrane 48.82 49.0
Os12t0133500-00 Rice plasma membrane 48.09 48.98
Os03t0128700-01 Rice mitochondrion 44.1 44.83
Os07t0409900-01 Rice plasma membrane 39.02 41.99
Os02t0126400-01 Rice cytosol 39.02 41.19
Os07t0619800-02 Rice cytosol, plasma membrane 33.39 40.62
Os12t0487250-01 Rice plastid 32.49 39.78
Os03t0366200-01 Rice cytosol, plasma membrane 19.06 36.33
Os07t0641200-01 Rice plasma membrane 16.52 34.73
Os06t0714200-01 Rice plasma membrane 35.57 31.46
Os10t0510700-00 Rice plasma membrane 34.3 25.89
Os07t0641000-01 Rice mitochondrion 2.18 4.11
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:4327438ProteinID:BAB92912.1
ProteinID:BAF06620.2ProteinID:BAS75067.1ProteinID:EEE55627.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004683
GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777GO:GO:0046872
InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os01g0832300EnsemblPlants:Os01t0832300-00PFAM:PF00069
PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222
PANTHER:PTHR24349PANTHER:PTHR24349:SF247InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q8LPZ7SMART:SM00054
SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00000A6E3DRefSeq:XP_015622474.1
SEG:seg:::::
Description
CALCIUM-DEPENDENT PROTEIN KINASE 3Similar to Calcium-dependent protein kinase. (Os01t0832300-00)
Coordinates
chr1:+:35619733..35625793
Molecular Weight (calculated)
61109.1 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.413
Length
551 amino acids
Sequence
(BLAST)
001: MGNCCRSPAA AAREDVKSSH FPASAGKKKP HQARNGGVGG GGGGGGGGGG GGGAGQKRLP VLGEEGCELI GGIDDKYALD RELGRGEFGV TYLCMDRDTK
101: ELLACKSISK RKLRTAVDVE DVRREVAIMR HLPKSASIVS LREACEDEGA VHLVMELCEG GELFDRIVAR GHYTERAAAN VTRTIVEVVQ LCHRHGVIHR
201: DLKPENFLFA NKKENSPLKA IDFGLSIFFK PGEKFSEIVG SPYYMAPEVL KRNYGPEIDI WSAGVILYIL LCGVPPFWAE TEQGVAQAIL RGNIDFKREP
301: WPNVSENAKD LVRRMLEPDP KLRLTAKQVL EHPWLQNAKK APNVPLGDIV KSRLKQFSRM NRFKRRALRV IADHLSAEEV EDIKEMFKAM DTDNDGIVSY
401: EELKSGIAKF GSHLAESEVQ MLIEAVDTNG KDALDYGEFL AVSLHLQRMA NDEHLRRAFL FFDKDGNGYI EPEELREALV DDGAGDSMEV VNDILQEVDT
501: DKDGKISYDE FVAMMKTGTD WRKASRHYSR GRFNSLSMKL IKDGSVKLVN E
Best Arabidopsis Sequence Match ( AT3G51850.1 )
(BLAST)
001: MGNCCRSPAA VAREDVKSNY SGHDHARKDA AGGKKSAPIR VLSDVPKENI EDRYLLDREL GRGEFGVTYL CIERSSRDLL ACKSISKRKL RTAVDIEDVK
101: REVAIMKHLP KSSSIVTLKE ACEDDNAVHL VMELCEGGEL FDRIVARGHY TERAAAGVTK TIVEVVQLCH KHGVIHRDLK PENFLFANKK ENSPLKAIDF
201: GLSIFFKPGE KFSEIVGSPY YMAPEVLKRN YGPEIDIWSA GVILYILLCG VPPFWAESEQ GVAQAILRGV IDFKREPWPN ISETAKNLVR QMLEPDPKRR
301: LTAKQVLEHP WIQNAKKAPN VPLGDVVKSR LKQFSVMNRF KRKALRVIAE FLSTEEVEDI KVMFNKMDTD NDGIVSIEEL KAGLRDFSTQ LAESEVQMLI
401: EAVDTKGKGT LDYGEFVAVS LHLQKVANDE HLRKAFSYFD KDGNGYILPQ ELCDALKEDG GDDCVDVAND IFQEVDTDKD GRISYEEFAA MMKTGTDWRK
501: ASRHYSRGRF NSLSIKLMKD GSLNLGNE
Arabidopsis Description
CPK13CPK13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEY4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.