Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88753 | Soybean | nucleus | 63.89 | 63.01 |
| VIT_18s0001g08710.t01 | Wine grape | nucleus | 29.17 | 51.85 |
| PGSC0003DMT400012575 | Potato | nucleus | 38.89 | 40.0 |
| Bra027855.1-P | Field mustard | nucleus | 34.03 | 32.89 |
| CDY30885 | Canola | nucleus | 34.03 | 32.89 |
| CDY67239 | Canola | nucleus | 34.03 | 32.89 |
| AT1G59530.1 | Thale cress | nucleus | 33.33 | 32.43 |
| KRH04390 | Soybean | nucleus | 34.03 | 29.17 |
| KRH77163 | Soybean | nucleus | 34.72 | 29.07 |
| KRH28324 | Soybean | nucleus | 33.33 | 28.24 |
| KRH58155 | Soybean | nucleus | 33.33 | 26.67 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:102661984 | MapMan:15.5.4.1 | EMBL:ACUP02003405 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G048500 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:K7KT53 | EnsemblPlants:KRH52132 | ProteinID:KRH52132 |
| ProteinID:KRH52132.1 | PFAM:PF07716 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF362 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00023C3551 | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:3644091..3645223
Molecular Weight (calculated)
16500.7 Da
IEP (calculated)
8.752
GRAVY (calculated)
-0.649
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFHQDEAVQ YPCTPVHETM LTESEIEDLF SLINHSTDPA SPGSGSQGSN RVVYSPEERK LRRMQSNRES ARRSRYRKKQ HIENLTSQLN RLRIQNRLLK
101: NQLASTMHQN LLLSLHNDHL KSESVALMAT LSDLCGILGT MLSH
101: NQLASTMHQN LLLSLHNDHL KSESVALMAT LSDLCGILGT MLSH
001: MFYTNMETVH NCFNDATITG DEIIDILAFL QSDESDNPSG INEVVPVDDK KRRRTISNRE SAKRSRMKKK KRFEELTEEV NRLNIRNQEL KNRLANVVSC
101: GNFISRENNR LKTESVCLEI RLLELYRFLV AMQSPISTSV NYITTLEI
101: GNFISRENNR LKTESVCLEI RLLELYRFLV AMQSPISTSV NYITTLEI
Arabidopsis Description
BZIP4Basic leucine zipper 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ65]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.