Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027855.1-P | Field mustard | nucleus | 70.95 | 70.47 |
| CDY67239 | Canola | nucleus | 70.95 | 70.47 |
| CDY30885 | Canola | nucleus | 70.27 | 69.8 |
| VIT_18s0001g08710.t01 | Wine grape | nucleus | 27.03 | 49.38 |
| KRH52132 | Soybean | nucleus | 32.43 | 33.33 |
| PGSC0003DMT400012575 | Potato | nucleus | 31.08 | 32.86 |
| KRG88753 | Soybean | nucleus | 29.05 | 29.45 |
| AT3G49760.1 | Thale cress | nucleus | 30.41 | 28.85 |
| AT2G22850.2 | Thale cress | nucleus | 28.38 | 18.5 |
| AT4G37730.1 | Thale cress | nucleus | 31.08 | 15.08 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:842243 | ProteinID:AAF79745.1 | ProteinID:AAK62790.1 | EMBL:AB493509 |
| ProteinID:AEE33584.1 | ProteinID:AEM36360.1 | EMBL:AF400619 | ArrayExpress:AT1G59530 | EnsemblPlantsGene:AT1G59530 | RefSeq:AT1G59530 |
| TAIR:AT1G59530 | RefSeq:AT1G59530-TAIR-G | EnsemblPlants:AT1G59530.1 | TAIR:AT1G59530.1 | Symbol:ATBZIP4 | ncoils:Coil |
| EMBL:DQ446373 | EMBL:DQ652903 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | RefSeq:NP_176162.1 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF362 | UniProt:Q9LQ65 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000009CDFB |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BZIP4Basic leucine zipper 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ65]
Coordinates
chr1:+:21868190..21868708
Molecular Weight (calculated)
17235.6 Da
IEP (calculated)
8.040
GRAVY (calculated)
-0.551
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYTNMETVH NCFNDATITG DEIIDILAFL QSDESDNPSG INEVVPVDDK KRRRTISNRE SAKRSRMKKK KRFEELTEEV NRLNIRNQEL KNRLANVVSC
101: GNFISRENNR LKTESVCLEI RLLELYRFLV AMQSPISTSV NYITTLEI
101: GNFISRENNR LKTESVCLEI RLLELYRFLV AMQSPISTSV NYITTLEI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.