Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05960 | Canola | nucleus | 64.1 | 53.76 |
| Bra036025.1-P | Field mustard | nucleus | 60.26 | 49.47 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 41.03 | 32.99 |
| KRH77163 | Soybean | nucleus | 34.62 | 31.4 |
| KRH04390 | Soybean | nucleus | 33.33 | 30.95 |
| AT1G59530.1 | Thale cress | nucleus | 28.85 | 30.41 |
| KRH28324 | Soybean | nucleus | 32.69 | 30.0 |
| KRH58155 | Soybean | nucleus | 32.05 | 27.78 |
| AT2G22850.2 | Thale cress | nucleus | 40.38 | 27.75 |
| PGSC0003DMT400055214 | Potato | nucleus | 38.46 | 27.15 |
| Solyc02g092090.1.1 | Tomato | nucleus | 36.54 | 26.64 |
| Solyc03g043900.1.1 | Tomato | nucleus | 32.69 | 25.12 |
| PGSC0003DMT400013972 | Potato | nucleus | 32.05 | 24.51 |
| AT4G37730.1 | Thale cress | nucleus | 41.03 | 20.98 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:824138 | UniProt:A0A178VAJ6 | ProteinID:AEE78587.1 | EMBL:AK226923 |
| ArrayExpress:AT3G49760 | EnsemblPlantsGene:AT3G49760 | RefSeq:AT3G49760 | TAIR:AT3G49760 | RefSeq:AT3G49760-TAIR-G | EnsemblPlants:AT3G49760.1 |
| TAIR:AT3G49760.1 | Symbol:AtbZIP5 | EMBL:BT024823 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | RefSeq:NP_566925.1 | ProteinID:OAP03337.1 | PFAM:PF07716 |
| PO:PO:0003015 | PO:PO:0006203 | PO:PO:0009005 | PO:PO:0020124 | PO:PO:0025257 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | UniProt:Q29PT3 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00001636F0 | InterPro:bZIP | : | : | : | : |
Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
Coordinates
chr3:-:18455231..18456125
Molecular Weight (calculated)
18361.1 Da
IEP (calculated)
9.987
GRAVY (calculated)
-0.743
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.