Factsheet for Solyc02g092090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
nucleus 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055214	Potato	nucleus	92.52	89.59
KRH28324	Soybean	nucleus	37.38	47.06
KRH77163	Soybean	nucleus	36.45	45.35
VIT_00s0541g00020.t01	Wine grape	nucleus	40.19	44.33
KRH04390	Soybean	nucleus	32.24	41.07
Solyc03g043900.1.1	Tomato	nucleus	38.78	40.89
KRH58155	Soybean	nucleus	33.64	40.0
CDY70316	Canola	nucleus	24.77	38.97
Bra031845.1-P	Field mustard	nucleus	24.3	38.24
AT3G49760.1	Thale cress	nucleus	26.64	36.54
CDY51983	Canola	nucleus	26.64	33.93
CDX69321	Canola	nucleus	38.78	33.6
CDX75671	Canola	nucleus	38.32	33.33
Bra011780.1-P	Field mustard	nucleus	38.32	33.33
CDX72653	Canola	nucleus	38.32	32.28
CDY05960	Canola	nucleus	28.04	32.26
CDY29581	Canola	nucleus	37.38	32.13
Bra017850.1-P	Field mustard	nucleus	35.05	31.25
Bra036025.1-P	Field mustard	nucleus	27.57	31.05
CDY37841	Canola	nucleus	28.97	30.39
AT2G22850.2	Thale cress	nucleus	31.31	29.52
AT4G37730.1	Thale cress	nucleus	38.32	26.89
CDY68879	Canola	nucleus	23.83	26.15
Bra024424.1-P	Field mustard	nucleus	25.23	21.69

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:K4BD06	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF261
SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc02g092090.1	EnsemblPlants:Solyc02g092090.1.1	UniParc:UPI0002767D5E	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:53299436..53300080

Molecular Weight (calculated)

24818.0 Da

IEP (calculated)

10.575

GRAVY (calculated)

-1.136

Length

214 amino acids

Sequence
(BLAST)

001: MLSTFPATTL SADGLFSNLF PAFDGGFTPW ECIEPAFLFS QQVESVVSPK ESPPPEPVIS NSDSGSDDSK PNSVHSSSGS DDPNRNNNNN NKSNRCPDER
101: KRQRTTSNRD MDERKRRRMV SNRESARRSR MRKQKHLENL RNQANRLKVG NREIMNRLRL ITHQCQVVQC ENERLRTESA ILRQRLEGIR QIWINRQFNS
201: YSAWACNNME QRPH

Best Arabidopsis Sequence Match ( AT4G37730.1 )
(BLAST)

001: MTQKLFIQYS LRSYIVFWKY DQITPWFVHK YQAPTMQFFP FPLLISLISL LEKLLAIMLS TAPAFSFSEP GLVNQFSGFQ TGFTPWEWDC SDLFFVDQMS
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ

Arabidopsis Description

AtbZIP7BZIP transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T062]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.