Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75671 | Canola | nucleus | 94.74 | 95.12 |
| CDX72653 | Canola | nucleus | 72.06 | 70.08 |
| CDY29581 | Canola | nucleus | 70.04 | 69.48 |
| AT4G37730.1 | Thale cress | nucleus | 73.28 | 59.34 |
| CDY70316 | Canola | nucleus | 22.67 | 41.18 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 31.17 | 39.69 |
| KRH04390 | Soybean | nucleus | 26.72 | 39.29 |
| Solyc02g092090.1.1 | Tomato | nucleus | 33.6 | 38.78 |
| PGSC0003DMT400055214 | Potato | nucleus | 34.01 | 38.01 |
| KRH28324 | Soybean | nucleus | 25.51 | 37.06 |
| KRH58155 | Soybean | nucleus | 26.72 | 36.67 |
| KRH77163 | Soybean | nucleus | 25.51 | 36.63 |
| CDY37841 | Canola | nucleus | 29.96 | 36.27 |
| CDY51983 | Canola | nucleus | 23.89 | 35.12 |
| CDY05960 | Canola | nucleus | 25.91 | 34.41 |
| Solyc03g043900.1.1 | Tomato | nucleus | 27.94 | 33.99 |
| PGSC0003DMT400013972 | Potato | nucleus | 27.94 | 33.82 |
| CDY67239 | Canola | nucleus | 18.62 | 30.87 |
| CDY30885 | Canola | nucleus | 18.22 | 30.2 |
| CDY68879 | Canola | nucleus | 21.86 | 27.69 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078BWY5 | EnsemblPlants:CDX69321 | ProteinID:CDX69321 | ProteinID:CDX69321.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00131156001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EDE8EA | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC01g01320D
Coordinates
chrLK031789:+:4131841..4132584
Molecular Weight (calculated)
28779.0 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.872
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTVPAISF LEPGTVNHFS GFQTGFTPWE GDCFDLLSMN HFFIEPAVPS PCYGESDSGL VRTNSGFDDI KTGSDESCAG FTKPGFDDTV SSQGLLCTQG
101: DKLDPDDPKQ WTAIANFEPG EKKHNRNKLI QPEMTDERKR KRMESNRESA RRSRMRRQSH IDNLRNQVNQ LDLENRELGN RLRLVIYHLQ QVNTDNNRLV
201: TEQEMLRLRL SELRRILILR QLQQQQQWEL NNRRMIMYEQ NPLRSYD
101: DKLDPDDPKQ WTAIANFEPG EKKHNRNKLI QPEMTDERKR KRMESNRESA RRSRMRRQSH IDNLRNQVNQ LDLENRELGN RLRLVIYHLQ QVNTDNNRLV
201: TEQEMLRLRL SELRRILILR QLQQQQQWEL NNRRMIMYEQ NPLRSYD
001: MTQKLFIQYS LRSYIVFWKY DQITPWFVHK YQAPTMQFFP FPLLISLISL LEKLLAIMLS TAPAFSFSEP GLVNQFSGFQ TGFTPWEWDC SDLFFVDQMS
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ
Arabidopsis Description
AtbZIP7BZIP transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T062]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.