Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70316 | Canola | nucleus | 57.84 | 86.76 |
| CDY51983 | Canola | nucleus | 50.0 | 60.71 |
| CDY05960 | Canola | nucleus | 40.69 | 44.62 |
| CDY68879 | Canola | nucleus | 36.76 | 38.46 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 34.8 | 36.6 |
| KRH04390 | Soybean | nucleus | 29.41 | 35.71 |
| KRH77163 | Soybean | nucleus | 28.43 | 33.72 |
| KRH28324 | Soybean | nucleus | 27.94 | 33.53 |
| KRH58155 | Soybean | nucleus | 28.43 | 32.22 |
| CDX69321 | Canola | nucleus | 36.27 | 29.96 |
| CDX75671 | Canola | nucleus | 35.78 | 29.67 |
| Solyc02g092090.1.1 | Tomato | nucleus | 30.39 | 28.97 |
| CDY30885 | Canola | nucleus | 21.08 | 28.86 |
| CDY67239 | Canola | nucleus | 21.08 | 28.86 |
| PGSC0003DMT400055214 | Potato | nucleus | 30.39 | 28.05 |
| CDX72653 | Canola | nucleus | 34.8 | 27.95 |
| CDY29581 | Canola | nucleus | 33.82 | 27.71 |
| Solyc03g043900.1.1 | Tomato | nucleus | 27.45 | 27.59 |
| PGSC0003DMT400013972 | Potato | nucleus | 26.47 | 26.47 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078HJJ0 | UniProt:A0A078HJJ0 | EnsemblPlants:CDY37841 | ProteinID:CDY37841 |
| ProteinID:CDY37841.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00064797001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EEBED6 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaAnng05020DBnaAnng05020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJJ0]
Coordinates
chrLK032409:-:251318..251932
Molecular Weight (calculated)
23607.2 Da
IEP (calculated)
9.110
GRAVY (calculated)
-0.720
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSILPGFLS QQILANHLQT LETRFTPWDD ASDIFSIFNS PVCPVEVNPA VEKTNSCQVL NKSDPCPGME DRPSNLTGLN VFFPKKDERQ KKRKKSNRES
101: ARRSRMKKQK YLDDLRSQLN QLNTENRELE NQLRYVMHHC QGANMENDRL RVENQILHEK LMSLRQALVL RQIQQSSTCA TWSCVNSTVV TVHQNPSMLR
201: DHVI
101: ARRSRMKKQK YLDDLRSQLN QLNTENRELE NQLRYVMHHC QGANMENDRL RVENQILHEK LMSLRQALVL RQIQQSSTCA TWSCVNSTVV TVHQNPSMLR
201: DHVI
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.