Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024424.1-P | Field mustard | nucleus | 79.76 | 53.82 |
| CDY37841 | Canola | nucleus | 60.71 | 50.0 |
| CDY70316 | Canola | nucleus | 38.1 | 47.06 |
| CDY68879 | Canola | nucleus | 47.62 | 41.03 |
| CDY05960 | Canola | nucleus | 43.45 | 39.25 |
| KRH04390 | Soybean | nucleus | 32.14 | 32.14 |
| KRH77163 | Soybean | nucleus | 31.55 | 30.81 |
| KRH28324 | Soybean | nucleus | 30.95 | 30.59 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 34.52 | 29.9 |
| KRH58155 | Soybean | nucleus | 30.95 | 28.89 |
| Solyc02g092090.1.1 | Tomato | nucleus | 33.93 | 26.64 |
| CDY67239 | Canola | nucleus | 23.21 | 26.17 |
| CDY30885 | Canola | nucleus | 23.21 | 26.17 |
| PGSC0003DMT400055214 | Potato | nucleus | 33.93 | 25.79 |
| CDX69321 | Canola | nucleus | 35.12 | 23.89 |
| CDX75671 | Canola | nucleus | 34.52 | 23.58 |
| Solyc03g043900.1.1 | Tomato | nucleus | 27.98 | 23.15 |
| PGSC0003DMT400013972 | Potato | nucleus | 27.98 | 23.04 |
| CDY29581 | Canola | nucleus | 30.36 | 20.48 |
| CDX72653 | Canola | nucleus | 30.36 | 20.08 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078ISE0 | UniProt:A0A078ISE0 | EnsemblPlants:CDY51983 | ProteinID:CDY51983 |
| ProteinID:CDY51983.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00004587001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EC6728 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaCnng21630DBnaCnng21630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISE0]
Coordinates
chrLK033044:-:69046..69552
Molecular Weight (calculated)
19424.3 Da
IEP (calculated)
9.732
GRAVY (calculated)
-0.881
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIFPVFSS EPGTCSALES GLTPWNHASD IFSMFDSPVC PVEVNPGLEK TNSCPIQTKN NPNPGSEDTH LPDKDERRNK RKKSNRESAR RSRIKKQKHL
101: EEVRSQLNQL KTENRDLLNR LRYFMHNCQH AKMESDRLRL EHKVLLDKLL NLRQALVLSP AELNMCMR
101: EEVRSQLNQL KTENRDLLNR LRYFMHNCQH AKMESDRLRL EHKVLLDKLL NLRQALVLSP AELNMCMR
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.