Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51983 | Canola | nucleus | 53.82 | 79.76 |
| Bra031845.1-P | Field mustard | nucleus | 31.33 | 57.35 |
| Bra036025.1-P | Field mustard | nucleus | 30.52 | 40.0 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 26.1 | 33.51 |
| KRH77163 | Soybean | nucleus | 22.89 | 33.14 |
| KRH04390 | Soybean | nucleus | 22.09 | 32.74 |
| KRH58155 | Soybean | nucleus | 23.29 | 32.22 |
| KRH28324 | Soybean | nucleus | 21.69 | 31.76 |
| Bra011780.1-P | Field mustard | nucleus | 25.3 | 25.61 |
| Solyc02g092090.1.1 | Tomato | nucleus | 21.69 | 25.23 |
| PGSC0003DMT400055214 | Potato | nucleus | 22.09 | 24.89 |
| Bra027855.1-P | Field mustard | nucleus | 14.86 | 24.83 |
| Solyc03g043900.1.1 | Tomato | nucleus | 20.08 | 24.63 |
| PGSC0003DMT400013972 | Potato | nucleus | 20.08 | 24.51 |
| Bra017850.1-P | Field mustard | nucleus | 20.88 | 21.67 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EnsemblPlantsGene:Bra024424 | EnsemblPlants:Bra024424.1 | EnsemblPlants:Bra024424.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M4E6M0 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000253EEB2 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
AT1G71350 (E=2e-023) | eukaryotic translation initiation factor SUI1 family protein
Coordinates
chrA06:-:15713696..15719993
Molecular Weight (calculated)
28646.5 Da
IEP (calculated)
8.900
GRAVY (calculated)
-0.484
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLRVEITVS KFQNRVLVYS IEGGCPMFFD IDGRGNNILP TFFALWEAPE ILPSFMLKGV VRTIMSSNFT VFSSEPGTCS ALESGLTPWN HASDIFSMFD
101: SPVCPVEVNP GLEKTNSCPI QTRNDPNPGL EDTHLPDKDE RRKKRKKSNR ESARRSRIKK QKHLEEVRSQ LNQLNTENRD LVNRLRYFMH HCQHAKMESD
201: RLRLEHKVLL DKLLNLRQAL VLRQVQQSST CACVESTVVT VYHQNPSMI
101: SPVCPVEVNP GLEKTNSCPI QTRNDPNPGL EDTHLPDKDE RRKKRKKSNR ESARRSRIKK QKHLEEVRSQ LNQLNTENRD LVNRLRYFMH HCQHAKMESD
201: RLRLEHKVLL DKLLNLRQAL VLRQVQQSST CACVESTVVT VYHQNPSMI
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.