Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05960 | Canola | nucleus | 87.37 | 89.25 |
| AT3G49760.1 | Thale cress | nucleus | 49.47 | 60.26 |
| Bra031845.1-P | Field mustard | nucleus | 35.26 | 49.26 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 34.21 | 33.51 |
| KRH77163 | Soybean | nucleus | 30.0 | 33.14 |
| KRH04390 | Soybean | nucleus | 27.37 | 30.95 |
| Bra024424.1-P | Field mustard | nucleus | 40.0 | 30.52 |
| KRH58155 | Soybean | nucleus | 28.42 | 30.0 |
| KRH28324 | Soybean | nucleus | 26.32 | 29.41 |
| Bra027855.1-P | Field mustard | nucleus | 22.11 | 28.19 |
| Solyc02g092090.1.1 | Tomato | nucleus | 31.05 | 27.57 |
| Solyc03g043900.1.1 | Tomato | nucleus | 27.89 | 26.11 |
| Bra011780.1-P | Field mustard | nucleus | 33.68 | 26.02 |
| PGSC0003DMT400013972 | Potato | nucleus | 27.89 | 25.98 |
| PGSC0003DMT400055214 | Potato | nucleus | 30.0 | 25.79 |
| Bra017850.1-P | Field mustard | nucleus | 31.05 | 24.58 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EnsemblPlantsGene:Bra036025 | EnsemblPlants:Bra036025.1 | EnsemblPlants:Bra036025.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M4F4M5 | PFAM:PF07716 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0001B36D7F |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
AT3G49760 (E=4e-045) AtbZIP5 | AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5); DNA binding / transcription factor
Coordinates
chrA09:-:24759417..24759989
Molecular Weight (calculated)
22458.5 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.841
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTIHPVLSC EPGQTTHVPA FETGFTPWDN SHLFSVFDSS MNKITHSVHE YLSPDSVNRS GPDVVATDSY TDERRKKRKL SNRESAKRSR VKKQKHLEEM
101: NIQLNQLKIE NRELENQIRY VIQHFQRTET ENNRLRLEQR LLHSTLLNIR QVWMLHQIDR SSDYVTWPYD ENTRVTVQHD PSVITNHIIL
101: NIQLNQLKIE NRELENQIRY VIQHFQRTET ENNRLRLEQR LLHSTLLNIR QVWMLHQIDR SSDYVTWPYD ENTRVTVQHD PSVITNHIIL
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.