Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036025.1-P | Field mustard | nucleus | 89.25 | 87.37 |
| AT3G49760.1 | Thale cress | nucleus | 53.76 | 64.1 |
| CDY70316 | Canola | nucleus | 34.41 | 47.06 |
| CDY68879 | Canola | nucleus | 48.92 | 46.67 |
| CDY51983 | Canola | nucleus | 39.25 | 43.45 |
| CDY37841 | Canola | nucleus | 44.62 | 40.69 |
| KRH77163 | Soybean | nucleus | 33.33 | 36.05 |
| KRH04390 | Soybean | nucleus | 31.72 | 35.12 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 34.95 | 33.51 |
| KRH58155 | Soybean | nucleus | 32.26 | 33.33 |
| KRH28324 | Soybean | nucleus | 28.49 | 31.18 |
| Solyc03g043900.1.1 | Tomato | nucleus | 31.18 | 28.57 |
| PGSC0003DMT400013972 | Potato | nucleus | 31.18 | 28.43 |
| Solyc02g092090.1.1 | Tomato | nucleus | 32.26 | 28.04 |
| CDY67239 | Canola | nucleus | 22.04 | 27.52 |
| CDY30885 | Canola | nucleus | 22.04 | 27.52 |
| PGSC0003DMT400055214 | Potato | nucleus | 32.26 | 27.15 |
| CDX75671 | Canola | nucleus | 34.95 | 26.42 |
| CDX69321 | Canola | nucleus | 34.41 | 25.91 |
| CDY29581 | Canola | nucleus | 32.26 | 24.1 |
| CDX72653 | Canola | nucleus | 32.26 | 23.62 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078EV97 | EnsemblPlants:CDY05960 | ProteinID:CDY05960 | ProteinID:CDY05960.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00121789001 | InterPro:IPR004827 | PFAM:PF07716 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EDF3E2 | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC08g21370D
Coordinates
chrLK031966:-:953657..954217
Molecular Weight (calculated)
22026.0 Da
IEP (calculated)
7.790
GRAVY (calculated)
-0.832
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSTIHPVLS CEPGQTTHVP AFETGFTPWD NSHLFSVFDS SMNIIPHSVH EYLSPDSVNR SGPDVVPTDS YTDERRKKRK LSNRESARRS RVKKQKHLEE
101: MNIQLNQLKI ENRELENQIR YVLQHFQRTE TENNRLRLEQ RLLHSMVLNI RQVLMLHQID RSSDYVTWPY DNNTRVTVQH DPVCDF
101: MNIQLNQLKI ENRELENQIR YVLQHFQRTE TENNRLRLEQ RLLHSMVLNI RQVLMLHQID RSSDYVTWPY DNNTRVTVQH DPVCDF
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.