CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011780.1-P	Field mustard	nucleus	99.59	99.59
CDX69321	Canola	nucleus	95.12	94.74
CDX72653	Canola	nucleus	72.76	70.47
CDY29581	Canola	nucleus	70.73	69.88
AT4G37730.1	Thale cress	nucleus	72.76	58.69
CDY70316	Canola	nucleus	22.36	40.44
VIT_00s0541g00020.t01	Wine grape	nucleus	31.71	40.21
KRH04390	Soybean	nucleus	26.83	39.29
Solyc02g092090.1.1	Tomato	nucleus	33.33	38.32
PGSC0003DMT400055214	Potato	nucleus	33.74	37.56
KRH58155	Soybean	nucleus	26.83	36.67
KRH28324	Soybean	nucleus	25.2	36.47
KRH77163	Soybean	nucleus	25.2	36.05
CDY37841	Canola	nucleus	29.67	35.78
CDY05960	Canola	nucleus	26.42	34.95
CDY51983	Canola	nucleus	23.58	34.52
Solyc03g043900.1.1	Tomato	nucleus	28.05	33.99
PGSC0003DMT400013972	Potato	nucleus	28.05	33.82
CDY67239	Canola	nucleus	18.7	30.87
CDY30885	Canola	nucleus	18.29	30.2
CDY68879	Canola	nucleus	21.95	27.69

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078CET4	EnsemblPlants:CDX75671	ProteinID:CDX75671	ProteinID:CDX75671.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00121598001	InterPro:IPR004827	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF261	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0004EE41BF	InterPro:bZIP	SEG:seg	:	:	:

Description

BnaA01g00310D

Coordinates

chrLK031804:+:2246835..2247575

Molecular Weight (calculated)

28587.9 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.815

Length

246 amino acids

Sequence
(BLAST)

001: MLSTVPAISF LEPGTVNHFS GFQTGFTPWE GDCFDLLSMN QFLIEPVVPS PCYGESDSGL VRTNSGFDDI KTGSDESCAG FIKPGFEDTV SSQGLLCTQG
101: DKPDPDDPKQ WTALANFEPG EKKHNRNKLI QPEMTDERKR KRMESNRESA RRSRMRRQSH IDNLRNQVNQ LDLENRELGN RLRLVIYHLQ QVNTDNNRLV
201: TEQEMLRLRF SELRRILILR QLQQQQQWEL NNRRMIMYEQ NPSTII

Best Arabidopsis Sequence Match ( AT4G37730.1 )
(BLAST)

001: MTQKLFIQYS LRSYIVFWKY DQITPWFVHK YQAPTMQFFP FPLLISLISL LEKLLAIMLS TAPAFSFSEP GLVNQFSGFQ TGFTPWEWDC SDLFFVDQMS
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ

Arabidopsis Description

AtbZIP7BZIP transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T062]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.