CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031845.1-P	Field mustard	nucleus	94.12	94.12
CDY37841	Canola	nucleus	86.76	57.84
CDY51983	Canola	nucleus	47.06	38.1
CDY05960	Canola	nucleus	47.06	34.41
KRH04390	Soybean	nucleus	36.76	29.76
CDY68879	Canola	nucleus	41.18	28.72
VIT_00s0541g00020.t01	Wine grape	nucleus	40.44	28.35
KRH77163	Soybean	nucleus	35.29	27.91
KRH58155	Soybean	nucleus	36.76	27.78
KRH28324	Soybean	nucleus	33.82	27.06
Solyc02g092090.1.1	Tomato	nucleus	38.97	24.77
PGSC0003DMT400055214	Potato	nucleus	39.71	24.43
CDY30885	Canola	nucleus	25.74	23.49
CDY67239	Canola	nucleus	25.74	23.49
Solyc03g043900.1.1	Tomato	nucleus	34.56	23.15
CDX69321	Canola	nucleus	41.18	22.67
CDX75671	Canola	nucleus	40.44	22.36
PGSC0003DMT400013972	Potato	nucleus	33.09	22.06
CDX72653	Canola	nucleus	38.24	20.47
CDY29581	Canola	nucleus	36.76	20.08

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078JXY5	UniProt:A0A078JXY5	EnsemblPlants:CDY70316	ProteinID:CDY70316
ProteinID:CDY70316.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00097952001	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF261	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0004EEBF24	InterPro:bZIP	SEG:seg	:	:

Description

BnaUnng03790DBnaUnng03790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXY5]

Coordinates

chrLK041767:+:1765..2175

Molecular Weight (calculated)

16107.4 Da

IEP (calculated)

10.667

GRAVY (calculated)

-1.013

Length

136 amino acids

Sequence
(BLAST)

001: MEDRPSNLTG LNVFFPTKDE REKKRKKSNR ESSRRSRMKK QKYLDDLRSQ LNQLNTENRE LGNKLRYVMH HCQGANMENE RLRVENQILH EKLMSLRQAL
101: VLRQIQQSST CATWSCVNST VVTVHQNPSM LRDHVI

Best Arabidopsis Sequence Match ( AT3G49760.1 )
(BLAST)

001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT

Arabidopsis Description

AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.