Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28324 | Soybean | nucleus | 83.72 | 84.71 |
| KRH04390 | Soybean | nucleus | 51.74 | 52.98 |
| KRH58155 | Soybean | nucleus | 53.49 | 51.11 |
| KRG88753 | Soybean | nucleus | 34.88 | 41.1 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 45.93 | 40.72 |
| Solyc02g092090.1.1 | Tomato | nucleus | 45.35 | 36.45 |
| PGSC0003DMT400013972 | Potato | nucleus | 43.02 | 36.27 |
| CDY70316 | Canola | nucleus | 27.91 | 35.29 |
| Solyc03g043900.1.1 | Tomato | nucleus | 41.28 | 34.98 |
| KRH52132 | Soybean | nucleus | 29.07 | 34.72 |
| AT3G49760.1 | Thale cress | nucleus | 31.4 | 34.62 |
| PGSC0003DMT400055214 | Potato | nucleus | 44.19 | 34.39 |
| Bra031845.1-P | Field mustard | nucleus | 26.74 | 33.82 |
| CDY05960 | Canola | nucleus | 36.05 | 33.33 |
| CDY51983 | Canola | nucleus | 30.81 | 31.55 |
| Bra036025.1-P | Field mustard | nucleus | 33.14 | 30.0 |
| CDY37841 | Canola | nucleus | 33.72 | 28.43 |
| CDY68879 | Canola | nucleus | 29.65 | 26.15 |
| CDX72653 | Canola | nucleus | 37.79 | 25.59 |
| CDX69321 | Canola | nucleus | 36.63 | 25.51 |
| CDY29581 | Canola | nucleus | 36.63 | 25.3 |
| CDX75671 | Canola | nucleus | 36.05 | 25.2 |
| Bra011780.1-P | Field mustard | nucleus | 36.05 | 25.2 |
| Bra017850.1-P | Field mustard | nucleus | 34.3 | 24.58 |
| AT2G22850.2 | Thale cress | nucleus | 31.4 | 23.79 |
| Bra024424.1-P | Field mustard | nucleus | 33.14 | 22.89 |
| AT4G37730.1 | Thale cress | nucleus | 36.05 | 20.33 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:102667230 | MapMan:15.5.4.1 | EMBL:ACUP02000658 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G195800 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1J9G7 | InterPro:IPR004827 | EnsemblPlants:KRH77163 | ProteinID:KRH77163 |
| ProteinID:KRH77163.1 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF364 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00023BDFBD | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:52980408..52981266
Molecular Weight (calculated)
19976.6 Da
IEP (calculated)
10.869
GRAVY (calculated)
-0.812
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSAISFQGN PFPALEYGFT PWDGLHSLGF KPTSPDPNHV TSSSGSDDPN RTHAEEKLAS DESNRVASIM EERKRRRMIS NRESARRSRV RKQRHLENLR
101: NQVNLFRVEN RELNNGLQFL LHHGNRLRTE NEWLRSERAL LRQKLANINQ LLLFQQLQAF SSAWPCNIVM AE
101: NQVNLFRVEN RELNNGLQFL LHHGNRLRTE NEWLRSERAL LRQKLANINQ LLLFQQLQAF SSAWPCNIVM AE
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.