Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G37730.1 | Thale cress | nucleus | 55.51 | 41.31 |
| AT3G49760.1 | Thale cress | nucleus | 27.75 | 40.38 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 33.04 | 38.66 |
| KRH04390 | Soybean | nucleus | 27.75 | 37.5 |
| KRH58155 | Soybean | nucleus | 25.99 | 32.78 |
| KRH28324 | Soybean | nucleus | 24.23 | 32.35 |
| PGSC0003DMT400055214 | Potato | nucleus | 30.84 | 31.67 |
| KRH77163 | Soybean | nucleus | 23.79 | 31.4 |
| Solyc02g092090.1.1 | Tomato | nucleus | 29.52 | 31.31 |
| PGSC0003DMT400013972 | Potato | nucleus | 26.43 | 29.41 |
| Solyc03g043900.1.1 | Tomato | nucleus | 25.99 | 29.06 |
| AT1G59530.1 | Thale cress | nucleus | 18.5 | 28.38 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:816816 | ProteinID:AAC32432.1 | ProteinID:AEC07364.1 | ProteinID:AEC07365.1 |
| ArrayExpress:AT2G22850 | EnsemblPlantsGene:AT2G22850 | RefSeq:AT2G22850 | TAIR:AT2G22850 | RefSeq:AT2G22850-TAIR-G | EnsemblPlants:AT2G22850.2 |
| TAIR:AT2G22850.2 | Symbol:AtbZIP6 | EMBL:BT010929 | EMBL:BT011649 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | InterPro:IPR004827 |
| RefSeq:NP_001189580.1 | RefSeq:NP_179870.1 | UniProt:O81002 | PFAM:PF00170 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0003015 | PO:PO:0004507 | PO:PO:0006203 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020124 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025257 | PO:PO:0025281 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000009C897 |
| InterPro:bZIP | Symbol:bZIP6 | : | : | : | : |
Description
AtbZIP6At2g22850 [Source:UniProtKB/TrEMBL;Acc:O81002]
Coordinates
chr2:-:9731279..9733545
Molecular Weight (calculated)
26040.9 Da
IEP (calculated)
8.359
GRAVY (calculated)
-0.672
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSTVPAFTF TEPGLVNQLS DFQTGFTPWE LNCSDLFSTI HLEPVVPSPC SGESDAGSVK INTDFNGFDE SCIGSIKTNS GSDDSNLFHG VPSPQSDELD
101: SKNTKIRSNA TNHNRNKLNR SVLQVTDDRK RKRMESNRES AKRSRMRKQR HIDNLKDEAN RLGLENRELA NRLRIVLYNI ALMCTDNNQL LSEQEILRRR
201: FLEMRQILIF RQLQLNPSLI INHHHMI
101: SKNTKIRSNA TNHNRNKLNR SVLQVTDDRK RKRMESNRES AKRSRMRKQR HIDNLKDEAN RLGLENRELA NRLRIVLYNI ALMCTDNNQL LSEQEILRRR
201: FLEMRQILIF RQLQLNPSLI INHHHMI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.