Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013972 | Potato | nucleus | 87.19 | 86.76 |
| KRH77163 | Soybean | nucleus | 34.98 | 41.28 |
| KRH28324 | Soybean | nucleus | 33.5 | 40.0 |
| Solyc02g092090.1.1 | Tomato | nucleus | 40.89 | 38.78 |
| KRH58155 | Soybean | nucleus | 33.0 | 37.22 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 35.47 | 37.11 |
| KRH04390 | Soybean | nucleus | 30.05 | 36.31 |
| CDY70316 | Canola | nucleus | 23.15 | 34.56 |
| Bra031845.1-P | Field mustard | nucleus | 22.66 | 33.82 |
| AT3G49760.1 | Thale cress | nucleus | 25.12 | 32.69 |
| CDY05960 | Canola | nucleus | 28.57 | 31.18 |
| CDX75671 | Canola | nucleus | 33.99 | 28.05 |
| Bra011780.1-P | Field mustard | nucleus | 33.99 | 28.05 |
| CDY51983 | Canola | nucleus | 23.15 | 27.98 |
| CDX72653 | Canola | nucleus | 34.98 | 27.95 |
| CDX69321 | Canola | nucleus | 33.99 | 27.94 |
| Bra036025.1-P | Field mustard | nucleus | 26.11 | 27.89 |
| CDY37841 | Canola | nucleus | 27.59 | 27.45 |
| CDY29581 | Canola | nucleus | 33.5 | 27.31 |
| Bra017850.1-P | Field mustard | nucleus | 31.03 | 26.25 |
| AT2G22850.2 | Thale cress | nucleus | 29.06 | 25.99 |
| CDY68879 | Canola | nucleus | 23.15 | 24.1 |
| AT4G37730.1 | Thale cress | nucleus | 33.0 | 21.97 |
| Bra024424.1-P | Field mustard | nucleus | 24.63 | 20.08 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| UniProt:K4BG10 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 |
| SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:Solyc03g043900.1 | EnsemblPlants:Solyc03g043900.1.1 | UniParc:UPI0002767FA0 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:7614369..7614980
Molecular Weight (calculated)
23655.9 Da
IEP (calculated)
9.792
GRAVY (calculated)
-0.932
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTILSSDG IFPNTFPSFY DDFTQWDCTE PTSTFPKQGV ELVFSPTQSP TPEPVISHDS GSGFDKSKPD SPNDSPNSGT HDLAERKRKR MISNRESARR
101: SRMRKQTHLE NLRNQSNRLK LENRDLTNRI QLITGHYQQI KRNNEMLRAE SIFLQERLKG IRDLLITRQL QQQLYNSAFA WPCNNLYVEQ RPHMINQPII
201: NHQ
101: SRMRKQTHLE NLRNQSNRLK LENRDLTNRI QLITGHYQQI KRNNEMLRAE SIFLQERLKG IRDLLITRQL QQQLYNSAFA WPCNNLYVEQ RPHMINQPII
201: NHQ
001: MMSTISPVFS TEPGLLTSVL PAFETSFTPW DISHLFSVFD SLIDPKPVST HDYGSVNQIG SDMSPTDNTD ERKKKRKLSN RESAKRSREK KQKHLEEMSI
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
101: QLNQLKIQNQ ELKNQLRYVL YHCQRTKMEN DRLLMEHRIL HDKLLNIRQV LMFRQT
Arabidopsis Description
AtbZIP5BZIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.