Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29581 | Canola | nucleus | 94.49 | 96.39 |
| CDX75671 | Canola | nucleus | 70.47 | 72.76 |
| CDX69321 | Canola | nucleus | 70.08 | 72.06 |
| AT4G37730.1 | Thale cress | nucleus | 70.87 | 59.02 |
| VIT_00s0541g00020.t01 | Wine grape | nucleus | 33.86 | 44.33 |
| Solyc02g092090.1.1 | Tomato | nucleus | 32.28 | 38.32 |
| CDY70316 | Canola | nucleus | 20.47 | 38.24 |
| PGSC0003DMT400055214 | Potato | nucleus | 33.07 | 38.01 |
| KRH77163 | Soybean | nucleus | 25.59 | 37.79 |
| KRH04390 | Soybean | nucleus | 24.8 | 37.5 |
| KRH28324 | Soybean | nucleus | 24.41 | 36.47 |
| KRH58155 | Soybean | nucleus | 25.2 | 35.56 |
| Solyc03g043900.1.1 | Tomato | nucleus | 27.95 | 34.98 |
| CDY37841 | Canola | nucleus | 27.95 | 34.8 |
| PGSC0003DMT400013972 | Potato | nucleus | 27.95 | 34.8 |
| CDY05960 | Canola | nucleus | 23.62 | 32.26 |
| CDY51983 | Canola | nucleus | 20.08 | 30.36 |
| CDY68879 | Canola | nucleus | 22.44 | 29.23 |
| CDY67239 | Canola | nucleus | 16.54 | 28.19 |
| CDY30885 | Canola | nucleus | 16.14 | 27.52 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078CCE7 | EnsemblPlants:CDX72653 | ProteinID:CDX72653 | ProteinID:CDX72653.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00100214001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF261 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EDC08F | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC07g46750D
Coordinates
chrLK031796:+:2396058..2396822
Molecular Weight (calculated)
29575.9 Da
IEP (calculated)
5.712
GRAVY (calculated)
-0.866
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTVPAFSM SDPGLVNQFQ GFQTGFTPWE WDCSDLFSVN QLSLEPAVPS PCFAESDSGL VKINSGFDDI KPGSDEEYTG FIKTKPGFDE AQSSHGVPDE
101: PDSDDPKQWT AIASLHSGEQ NHNRNTLIQP EMTEEKKRKR MESNRESAKR SRMRKQSHIN NLRNQVNQLD MENRELKNRL QLFTYQLQRV NTDNIQLVAE
201: QDILRLRLSE MRRILMIRQL QQQQQQQWEL NNRRMIMIEQ NPSTIMDHMI YISK
101: PDSDDPKQWT AIASLHSGEQ NHNRNTLIQP EMTEEKKRKR MESNRESAKR SRMRKQSHIN NLRNQVNQLD MENRELKNRL QLFTYQLQRV NTDNIQLVAE
201: QDILRLRLSE MRRILMIRQL QQQQQQQWEL NNRRMIMIEQ NPSTIMDHMI YISK
001: MTQKLFIQYS LRSYIVFWKY DQITPWFVHK YQAPTMQFFP FPLLISLISL LEKLLAIMLS TAPAFSFSEP GLVNQFSGFQ TGFTPWEWDC SDLFFVDQMS
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ
101: LEPAIPSPCY GESDTGSVKI NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE NNHNRKKMIQ PEMTDERKRK
201: RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN
301: HPHLQ
Arabidopsis Description
AtbZIP7BZIP transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T062]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.