Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77058 | Soybean | nucleus | 91.92 | 89.51 |
| KRH57983 | Soybean | nucleus | 65.32 | 65.76 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 68.35 | 65.06 |
| KRH61351 | Soybean | nucleus | 50.84 | 58.3 |
| KRH05621 | Soybean | nucleus | 52.53 | 58.21 |
| CDY22442 | Canola | nucleus | 53.2 | 57.45 |
| CDX75635 | Canola | nucleus | 56.57 | 56.19 |
| CDY44045 | Canola | nucleus | 53.87 | 56.14 |
| KRH15420 | Soybean | nucleus | 51.18 | 55.68 |
| CDX69287 | Canola | nucleus | 56.9 | 55.23 |
| PGSC0003DMT400008569 | Potato | nucleus | 57.91 | 53.75 |
| Solyc04g078420.1.1 | Tomato | nucleus | 59.26 | 53.66 |
| CDX72621 | Canola | nucleus | 47.81 | 53.58 |
| CDY29542 | Canola | nucleus | 47.81 | 53.58 |
| Bra017813.1-P | Field mustard | nucleus | 47.81 | 53.58 |
| CDY38933 | Canola | nucleus | 52.53 | 53.42 |
| Bra032176.1-P | Field mustard | nucleus | 52.53 | 53.42 |
| CDX89554 | Canola | nucleus | 52.53 | 53.24 |
| Bra010593.1-P | Field mustard | nucleus | 54.55 | 53.11 |
| Zm00001d005300_P001 | Maize | nucleus | 50.17 | 52.28 |
| Bra011749.1-P | Field mustard | nucleus | 56.9 | 51.52 |
| Os09t0106700-01 | Rice | nucleus | 55.22 | 51.41 |
| AT4G37260.1 | Thale cress | nucleus | 55.22 | 51.25 |
| AT2G23290.1 | Thale cress | nucleus | 52.53 | 50.49 |
| Solyc02g092930.1.1 | Tomato | nucleus | 61.28 | 50.42 |
| KRH37830 | Soybean | nucleus | 23.91 | 50.0 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 61.95 | 49.6 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 54.21 | 47.92 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 53.87 | 47.76 |
| Zm00001d019712_P001 | Maize | nucleus | 54.21 | 46.67 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 53.87 | 46.65 |
| KRH61246 | Soybean | nucleus | 32.66 | 46.19 |
| KRH51945 | Soybean | nucleus | 34.34 | 46.15 |
| EER98550 | Sorghum | nucleus | 54.55 | 44.26 |
| KRH14928 | Soybean | nucleus | 34.01 | 42.44 |
| KRH73284 | Soybean | nucleus | 34.34 | 41.3 |
| KRH05732 | Soybean | nucleus | 31.99 | 38.46 |
| HORVU5Hr1G049880.1 | Barley | plastid | 52.53 | 36.79 |
| KRH75766 | Soybean | nucleus | 37.37 | 31.71 |
| KRG88785 | Soybean | nucleus | 37.04 | 31.25 |
| KRG94450 | Soybean | nucleus | 15.15 | 28.48 |
| KRH38975 | Soybean | nucleus | 22.22 | 27.85 |
| KRH09502 | Soybean | nucleus | 21.89 | 27.78 |
| KRH15916 | Soybean | nucleus | 21.55 | 26.45 |
| KRH15016 | Soybean | nucleus | 34.34 | 25.95 |
| KRH73115 | Soybean | nucleus | 30.64 | 22.81 |
| KRH64569 | Soybean | nucleus | 25.93 | 22.78 |
| KRH53362 | Soybean | nucleus | 25.25 | 22.66 |
| KRG94926 | Soybean | nucleus | 25.59 | 20.11 |
| KRH64970 | Soybean | nucleus | 25.25 | 18.52 |
| KRH50566 | Soybean | nucleus | 24.24 | 16.51 |
| KRH74887 | Soybean | plastid | 24.92 | 15.91 |
| KRH70748 | Soybean | nucleus | 24.92 | 15.85 |
| KRG89586 | Soybean | nucleus | 23.23 | 14.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778197 | EMBL:ACUP02006750 | EMBL:DQ822883 | EnsemblPlantsGene:GLYMA_11G052100 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH28419 | ProteinID:KRH28419 |
| ProteinID:KRH28419.1 | EMBL:KT031262 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF940 | UniProt:Q0PJL9 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000DBD897 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:3908459..3910505
Molecular Weight (calculated)
32700.9 Da
IEP (calculated)
10.079
GRAVY (calculated)
-0.475
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRIKGPWSP EEDEALQKLV EKHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRAF TAEEDDTIIR AHARFGNKWA TIARLLHGRT DNAIKNHWNS
101: TLKRKCSSTM IDDNTQPLKR SVSAGAAIPV STGLYMNPPT PGSPSGSDVS ESSLPVASSS HVFRPVPRTV KVLPPVETTS SSNDPPTSLS LSLPGVGVVD
201: SSEVSNRTTE PIHFTPPMPH RSNTMPLLPM MTSVSATVMA PFNFSAEFRS VMQEMIRKEV RSYIELHNQN GMCFQAAVND GFRNASVKRI GISRVDS
101: TLKRKCSSTM IDDNTQPLKR SVSAGAAIPV STGLYMNPPT PGSPSGSDVS ESSLPVASSS HVFRPVPRTV KVLPPVETTS SSNDPPTSLS LSLPGVGVVD
201: SSEVSNRTTE PIHFTPPMPH RSNTMPLLPM MTSVSATVMA PFNFSAEFRS VMQEMIRKEV RSYIELHNQN GMCFQAAVND GFRNASVKRI GISRVDS
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.