Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38975 | Soybean | nucleus | 90.6 | 89.45 |
| KRG94450 | Soybean | nucleus | 60.26 | 89.24 |
| VIT_17s0000g01890.t01 | Wine grape | nucleus | 59.4 | 62.9 |
| CDY21728 | Canola | nucleus | 41.88 | 62.42 |
| CDY35992 | Canola | nucleus | 41.03 | 61.15 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 52.56 | 58.57 |
| CDX83880 | Canola | nucleus | 44.44 | 57.14 |
| CDX72988 | Canola | nucleus | 53.85 | 55.75 |
| Bra015992.1-P | Field mustard | nucleus | 54.27 | 55.7 |
| CDX96475 | Canola | nucleus | 54.27 | 55.7 |
| CDX82074 | Canola | nucleus | 54.7 | 54.94 |
| AT1G17950.1 | Thale cress | nucleus | 57.69 | 54.22 |
| CDX81853 | Canola | nucleus | 56.84 | 53.85 |
| PGSC0003DMT400079714 | Potato | nucleus | 55.98 | 53.69 |
| CDY58312 | Canola | nucleus | 53.42 | 53.42 |
| Bra008096.1-P | Field mustard | nucleus | 53.42 | 53.42 |
| Bra016575.1-P | Field mustard | nucleus | 54.7 | 52.89 |
| CDX96742 | Canola | nucleus | 54.7 | 52.89 |
| Bra031008.1-P | Field mustard | nucleus | 55.56 | 52.63 |
| AT1G73410.1 | Thale cress | nucleus | 54.27 | 52.26 |
| CDY21727 | Canola | nucleus | 55.13 | 51.39 |
| EER93554 | Sorghum | nucleus | 51.71 | 50.63 |
| Zm00001d013399_P001 | Maize | nucleus | 51.71 | 50.42 |
| Os03t0720800-01 | Rice | nucleus | 51.28 | 48.98 |
| Zm00001d033815_P001 | Maize | nucleus | 51.71 | 48.79 |
| HORVU4Hr1G008640.1 | Barley | nucleus | 49.57 | 47.74 |
| TraesCS4B01G052400.2 | Wheat | nucleus | 49.57 | 46.59 |
| TraesCS4D01G052600.1 | Wheat | nucleus | 49.15 | 46.0 |
| TraesCS4A01G262500.3 | Wheat | nucleus | 49.15 | 41.67 |
| KRH53362 | Soybean | nucleus | 50.43 | 35.65 |
| KRH64569 | Soybean | nucleus | 50.43 | 34.91 |
| KRH15916 | Soybean | nucleus | 35.47 | 34.3 |
| KRH37830 | Soybean | nucleus | 19.23 | 31.69 |
| KRH61246 | Soybean | nucleus | 25.64 | 28.57 |
| KRG94926 | Soybean | nucleus | 44.87 | 27.78 |
| KRH51945 | Soybean | nucleus | 25.64 | 27.15 |
| KRH64970 | Soybean | nucleus | 45.73 | 26.42 |
| KRH61351 | Soybean | nucleus | 29.06 | 26.25 |
| KRH05621 | Soybean | nucleus | 28.63 | 25.0 |
| KRH15420 | Soybean | nucleus | 29.06 | 24.91 |
| KRH50566 | Soybean | nucleus | 46.15 | 24.77 |
| KRH05732 | Soybean | nucleus | 25.64 | 24.29 |
| KRH74887 | Soybean | plastid | 45.3 | 22.8 |
| KRH14928 | Soybean | nucleus | 23.08 | 22.69 |
| KRH70748 | Soybean | nucleus | 44.44 | 22.27 |
| KRH73284 | Soybean | nucleus | 23.5 | 22.27 |
| KRH28419 | Soybean | nucleus | 27.78 | 21.89 |
| KRG89586 | Soybean | nucleus | 45.3 | 21.81 |
| KRH77058 | Soybean | nucleus | 27.78 | 21.31 |
| KRH57983 | Soybean | nucleus | 26.5 | 21.02 |
| KRH75766 | Soybean | nucleus | 28.63 | 19.14 |
| KRG88785 | Soybean | nucleus | 28.21 | 18.75 |
| KRH15016 | Soybean | nucleus | 28.21 | 16.79 |
| KRH73115 | Soybean | nucleus | 27.35 | 16.04 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100785170 | MapMan:15.5.2.1 | EMBL:ACUP02010280 | EnsemblPlantsGene:GLYMA_16G218900 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1MQM9 | InterPro:IPR017930 | EnsemblPlants:KRH09502 | ProteinID:KRH09502 |
| ProteinID:KRH09502.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF665 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233B4BE | : | : |
Description
hypothetical protein
Coordinates
chr16:+:37627774..37630738
Molecular Weight (calculated)
27130.6 Da
IEP (calculated)
8.027
GRAVY (calculated)
-0.933
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSRGHWRPA EDEKLRELVE HYGPHNWNAI AEKLRGRSGK SCRLRWFNQL DPRINRNPFT EEEEERLLAS HRIHGNRWAV IARHFPGRTD NAVKNHWHVM
101: MARIRRERSK INNPKLQPLF APNLKDDLEA IPSFVEKYYE KYSHPCVTLT HSSFQFPGKK FYFQDPSSAG STVPPGKSQS VEFYDFLQVN TDSNESEVTD
201: NARRDDEEVS QDAVGQKNKD NGVPFIDFLS TGGC
101: MARIRRERSK INNPKLQPLF APNLKDDLEA IPSFVEKYYE KYSHPCVTLT HSSFQFPGKK FYFQDPSSAG STVPPGKSQS VEFYDFLQVN TDSNESEVTD
201: NARRDDEEVS QDAVGQKNKD NGVPFIDFLS TGGC
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.