CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51945	Soybean	nucleus	76.06	48.87
KRH61246	Soybean	nucleus	71.83	48.57
VIT_18s0001g11170.t01	Wine grape	nucleus	67.61	41.92
PGSC0003DMT400020635	Potato	nucleus	63.38	35.86
Solyc04g079360.1.1	Tomato	nucleus	63.38	35.71
KRH05732	Soybean	nucleus	54.93	31.58
KRH14928	Soybean	nucleus	44.37	26.47
KRH61351	Soybean	nucleus	47.18	25.87
KRH73284	Soybean	nucleus	43.66	25.1
KRH57983	Soybean	nucleus	51.41	24.75
KRH15420	Soybean	nucleus	46.48	24.18
KRH28419	Soybean	nucleus	50.0	23.91
KRH05621	Soybean	nucleus	45.07	23.88
KRH77058	Soybean	nucleus	49.3	22.95
KRG94450	Soybean	nucleus	24.65	22.15
KRH38975	Soybean	nucleus	32.39	19.41
KRG88785	Soybean	nucleus	47.89	19.32
KRH09502	Soybean	nucleus	31.69	19.23
KRH75766	Soybean	nucleus	47.18	19.14
KRH15916	Soybean	nucleus	28.17	16.53
KRH15016	Soybean	nucleus	44.37	16.03
KRH53362	Soybean	nucleus	35.92	15.41
KRH64569	Soybean	nucleus	36.62	15.38
KRH73115	Soybean	nucleus	40.14	14.29
KRG94926	Soybean	nucleus	37.32	14.02
KRH64970	Soybean	nucleus	36.62	12.84
KRH50566	Soybean	nucleus	38.03	12.39
KRH74887	Soybean	plastid	38.73	11.83
KRH70748	Soybean	nucleus	37.32	11.35
KRG89586	Soybean	nucleus	38.73	11.32

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100778610	MapMan:15.5.2.1	EMBL:ACUP02005519	EnsemblPlantsGene:GLYMA_09G092500	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LCR2	EnsemblPlants:KRH37830	ProteinID:KRH37830
ProteinID:KRH37830.1	InterPro:Myb_dom	PFAM:PF13921	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF611
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233D4D2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:12578762..12579190

Molecular Weight (calculated)

16601.8 Da

IEP (calculated)

10.463

GRAVY (calculated)

-0.759

Length

142 amino acids

Sequence
(BLAST)

001: MEVTNKSSSF TFSSFDCCSS ESNPNKPSRI KGPWSTEEVQ ILIRLVERYD PQNWSLISRY IKGRSNKLCL LRWCNQLSPP MEHRPFSAQE NDTIIVAYAK
101: YDNRWATIAR LLPGRTNNAI KNHWNSILKR RAKGIQRTDK WP

Best Arabidopsis Sequence Match ( AT2G23290.1 )
(BLAST)

001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE

Arabidopsis Description

AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.