CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64970	Soybean	nucleus	93.92	87.65
Solyc10g081320.1.1	Tomato	nucleus	42.33	50.16
PGSC0003DMT400072258	Potato	nucleus	41.8	49.22
KRH38975	Soybean	nucleus	28.31	45.15
KRH09502	Soybean	nucleus	27.78	44.87
KRG94450	Soybean	nucleus	16.93	40.51
CDX85443	Canola	nucleus	32.8	40.39
CDY16884	Canola	nucleus	33.07	40.06
CDY02687	Canola	nucleus	32.54	39.68
Bra023637.1-P	Field mustard	nucleus	32.8	38.99
Bra006422.1-P	Field mustard	nucleus	32.28	38.98
CDX78761	Canola	nucleus	32.01	38.66
Bra002107.1-P	Field mustard	nucleus	33.07	38.58
CDY38460	Canola	nucleus	33.07	38.58
AT5G17800.1	Thale cress	nucleus	32.8	38.39
CDX70776	Canola	nucleus	31.75	38.34
CDY69058	Canola	nucleus	26.72	38.26
KRH37830	Soybean	nucleus	14.02	37.32
VIT_08s0056g01190.t01	Wine grape	golgi	40.74	34.53
KRH15916	Soybean	nucleus	21.69	33.88
KRH53362	Soybean	nucleus	29.1	33.23
KRH50566	Soybean	nucleus	37.57	32.57
KRH64569	Soybean	nucleus	28.84	32.25
KRH61246	Soybean	nucleus	17.72	31.9
KRG89586	Soybean	nucleus	38.89	30.25
KRH51945	Soybean	nucleus	17.46	29.86
KRH74887	Soybean	plastid	35.98	29.25
KRH70748	Soybean	nucleus	35.98	29.12
KRH61351	Soybean	nucleus	19.31	28.19
KRH15420	Soybean	nucleus	20.11	27.84
KRH05621	Soybean	nucleus	19.05	26.87
KRH14928	Soybean	nucleus	16.67	26.47
KRH05732	Soybean	nucleus	16.93	25.91
KRH28419	Soybean	nucleus	20.11	25.59
KRH73284	Soybean	nucleus	16.67	25.51
KRH57983	Soybean	nucleus	19.84	25.42
KRH77058	Soybean	nucleus	19.84	24.59
KRH75766	Soybean	nucleus	20.11	21.71
KRG88785	Soybean	nucleus	19.84	21.31
KRH15016	Soybean	nucleus	19.05	18.32
KRH73115	Soybean	nucleus	17.46	16.54

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100791795	MapMan:15.5.2.1	EMBL:ACUP02012063	EnsemblPlantsGene:GLYMA_19G118500	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	UniProt:I1N8F4	InterPro:IPR017930	EnsemblPlants:KRG94926	ProteinID:KRG94926
ProteinID:KRG94926.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF941
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233EA05	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:37591977..37594433

Molecular Weight (calculated)

41718.8 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.646

Length

378 amino acids

Sequence
(BLAST)

001: MSSSQHLNNV GEGSNRDMSF FPPSSLYVGS SQTPPLSMGH ENGVEGSKPE MGLQIFGSTV FQPSECRGTK RASDEEGVEI ENRNLCLKLA DEAQAKSSAS
101: GKIKLCARGH WRPAEDERLK ELVAQYGPQN WNLIAENLEG RSGKSCRLRW FNQLDPRINR RSFSEEEEER LITAHRMYGN KWAMIARLFP GRTDNAVKNH
201: WHVIMARRQR EHSSSVYRRR KLVVNETLPK GLDLTLSNNA GSESTISSTI DESASTCTNL SLTPSSAKVT PPFRRLFDHP GPSQNHQAFG SLIGQARGDV
301: SFNKFCGASW KGVAYKKADQ VGKLKGVDQS NFSDANSEVS VSESVATNRS NVSISEESET VGDKINMPFI DFLGVGAT

Best Arabidopsis Sequence Match ( AT1G69560.1 )
(BLAST)

001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.