Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75766 | Soybean | nucleus | 93.75 | 94.29 |
| VIT_08s0007g01540.t01 | Wine grape | nucleus | 66.19 | 56.83 |
| PGSC0003DMT400052395 | Potato | nucleus | 59.38 | 55.15 |
| Solyc09g011780.2.1 | Tomato | nucleus | 58.81 | 54.47 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 49.43 | 54.04 |
| KRH37830 | Soybean | nucleus | 19.32 | 47.89 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 30.4 | 47.56 |
| KRH15016 | Soybean | nucleus | 49.72 | 44.53 |
| KRH61246 | Soybean | nucleus | 25.0 | 41.9 |
| KRH51945 | Soybean | nucleus | 25.85 | 41.18 |
| KRH73115 | Soybean | nucleus | 44.03 | 38.85 |
| KRH14928 | Soybean | nucleus | 26.14 | 38.66 |
| OQU87862 | Sorghum | nucleus | 42.33 | 37.34 |
| KRH73284 | Soybean | nucleus | 26.14 | 37.25 |
| KRH61351 | Soybean | nucleus | 27.27 | 37.07 |
| KRH28419 | Soybean | nucleus | 31.25 | 37.04 |
| Zm00001d012379_P001 | Maize | nucleus | 41.48 | 36.41 |
| KRH77058 | Soybean | nucleus | 31.25 | 36.07 |
| Os01t0850400-01 | Rice | nucleus | 42.05 | 35.84 |
| KRH05621 | Soybean | nucleus | 26.7 | 35.07 |
| KRH57983 | Soybean | nucleus | 29.26 | 34.92 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 38.64 | 34.26 |
| KRH15420 | Soybean | nucleus | 25.57 | 32.97 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 41.76 | 31.82 |
| KRH05732 | Soybean | nucleus | 22.16 | 31.58 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 41.76 | 31.41 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 41.48 | 31.13 |
| HORVU3Hr1G085570.1 | Barley | plastid | 40.62 | 31.02 |
| KRG94450 | Soybean | nucleus | 12.78 | 28.48 |
| KRH09502 | Soybean | nucleus | 18.75 | 28.21 |
| KRH38975 | Soybean | nucleus | 18.75 | 27.85 |
| KRH53362 | Soybean | nucleus | 23.3 | 24.77 |
| KRH15916 | Soybean | nucleus | 16.48 | 23.97 |
| KRH64569 | Soybean | nucleus | 23.01 | 23.96 |
| KRG94926 | Soybean | nucleus | 21.31 | 19.84 |
| KRH64970 | Soybean | nucleus | 21.31 | 18.52 |
| KRH50566 | Soybean | nucleus | 21.88 | 17.66 |
| KRH74887 | Soybean | plastid | 22.16 | 16.77 |
| KRH70748 | Soybean | nucleus | 21.59 | 16.27 |
| KRG89586 | Soybean | nucleus | 21.88 | 15.84 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100813406 | MapMan:15.5.2.1 | EnsemblPlantsGene:GLYMA_U027500 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | UniProt:I1JLW1 | InterPro:IPR017930 | EnsemblPlants:KRG88785 | ProteinID:KRG88785 | ProteinID:KRG88785.1 |
| InterPro:Myb_dom | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002336B51 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_27:+:230961..242214
Molecular Weight (calculated)
37847.3 Da
IEP (calculated)
6.291
GRAVY (calculated)
-0.488
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEETAAAA ADGSGDEGLL GLDSGSGGGG RDRVKGPWSP EEDVILSRLV SKFGARNWSL IARGISGRSG KSCRLRWCNQ LDPAVKRKPF TDEEDQMIVA
101: AHAIHGNKWA AIARLLPGRT DNAIKNHWNS TLRRRGVGHD TIKLESGSFM EDVSLEKAKA SSEDTLSCGD VSLKSSEGRD VSSMEIMDDK SDGKAQTEGQ
201: LHHEVKDPPT LFRPVARVSA FNVYHSFDGT QPSTSIPRSV SMQGPVLQSS KPDMEFYRAL EGIFGDQSVP HQCGHGCCAA PNGRKSESSL LGPEFIEFSE
301: PPSFPNFELA AIATDISNLA WLKSGLESSS VKIMGNTSGR VVSNGSQVHI GH
101: AHAIHGNKWA AIARLLPGRT DNAIKNHWNS TLRRRGVGHD TIKLESGSFM EDVSLEKAKA SSEDTLSCGD VSLKSSEGRD VSSMEIMDDK SDGKAQTEGQ
201: LHHEVKDPPT LFRPVARVSA FNVYHSFDGT QPSTSIPRSV SMQGPVLQSS KPDMEFYRAL EGIFGDQSVP HQCGHGCCAA PNGRKSESSL LGPEFIEFSE
301: PPSFPNFELA AIATDISNLA WLKSGLESSS VKIMGNTSGR VVSNGSQVHI GH
001: MEAEIVRRSE VTGLRREVEE SSIGRGDCDG DGGDVGEDAA GFVGTSGRGR RDRVKGPWSK EEDDVLSELV KRLGARNWSF IARSIPGRSG KSCRLRWCNQ
101: LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT
201: PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG
301: CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST
101: LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT
201: PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG
301: CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST
Arabidopsis Description
MYB1Transcription factor MYB1 [Source:UniProtKB/Swiss-Prot;Acc:Q42575]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.