Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64569 | Soybean | nucleus | 93.35 | 91.42 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 30.21 | 59.52 |
| VIT_18s0001g15260.t01 | Wine grape | nucleus | 55.89 | 57.63 |
| Zm00001d004681_P001 | Maize | nucleus | 32.02 | 55.5 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 41.39 | 53.52 |
| KRH09502 | Soybean | nucleus | 35.65 | 50.43 |
| KRH38975 | Soybean | nucleus | 35.35 | 49.37 |
| PGSC0003DMT400063862 | Potato | nucleus | 44.11 | 48.34 |
| KRG94450 | Soybean | nucleus | 22.96 | 48.1 |
| Solyc04g064540.2.1 | Tomato | nucleus | 44.71 | 47.9 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 37.76 | 47.53 |
| GSMUA_Achr10P... | Banana | nucleus | 37.16 | 47.31 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 39.27 | 47.27 |
| Zm00001d041818_P001 | Maize | nucleus | 31.72 | 46.67 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 38.97 | 46.57 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 38.97 | 46.4 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 38.67 | 46.38 |
| Os11t0207600-00 | Rice | nucleus, plastid | 36.25 | 44.94 |
| EES09660 | Sorghum | nucleus | 37.46 | 44.93 |
| Zm00001d049079_P001 | Maize | nucleus | 37.16 | 44.4 |
| AT4G33450.1 | Thale cress | nucleus | 33.53 | 44.4 |
| CDY71713 | Canola | nucleus | 30.82 | 44.35 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 35.05 | 44.27 |
| CDX68977 | Canola | nucleus | 32.33 | 42.8 |
| CDY28302 | Canola | nucleus | 32.02 | 42.23 |
| CDX75353 | Canola | nucleus | 32.02 | 42.23 |
| Bra034565.1-P | Field mustard | nucleus | 32.02 | 42.23 |
| Bra011441.1-P | Field mustard | nucleus | 31.72 | 42.17 |
| EES15780 | Sorghum | nucleus | 32.02 | 42.06 |
| KRH15916 | Soybean | nucleus | 26.28 | 35.95 |
| KRH37830 | Soybean | nucleus | 15.41 | 35.92 |
| KRH61246 | Soybean | nucleus | 19.94 | 31.43 |
| KRG94926 | Soybean | nucleus | 33.23 | 29.1 |
| KRH61351 | Soybean | nucleus | 22.36 | 28.57 |
| KRH51945 | Soybean | nucleus | 19.03 | 28.51 |
| KRH05621 | Soybean | nucleus | 22.96 | 28.36 |
| KRH64970 | Soybean | nucleus | 33.84 | 27.65 |
| KRH15420 | Soybean | nucleus | 22.66 | 27.47 |
| KRH14928 | Soybean | nucleus | 19.03 | 26.47 |
| KRH74887 | Soybean | plastid | 36.86 | 26.24 |
| KRH50566 | Soybean | nucleus | 34.44 | 26.15 |
| KRH70748 | Soybean | nucleus | 36.25 | 25.7 |
| KRH73284 | Soybean | nucleus | 19.03 | 25.51 |
| KRH05732 | Soybean | nucleus | 19.03 | 25.51 |
| KRH57983 | Soybean | nucleus | 22.66 | 25.42 |
| KRH28419 | Soybean | nucleus | 22.66 | 25.25 |
| KRH77058 | Soybean | nucleus | 22.36 | 24.26 |
| KRG89586 | Soybean | nucleus | 34.44 | 23.46 |
| KRH75766 | Soybean | nucleus | 24.77 | 23.43 |
| KRG88785 | Soybean | nucleus | 24.77 | 23.3 |
| KRH15016 | Soybean | nucleus | 23.26 | 19.59 |
| KRH73115 | Soybean | nucleus | 22.96 | 19.05 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100802283 | MapMan:15.5.2.1 | EMBL:ACUP02003459 | EnsemblPlantsGene:GLYMA_06G121200 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7KUM6 | EnsemblPlants:KRH53362 | ProteinID:KRH53362 |
| ProteinID:KRH53362.1 | InterPro:Myb_dom | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF496 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002339480 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:9867126..9869310
Molecular Weight (calculated)
37963.9 Da
IEP (calculated)
8.995
GRAVY (calculated)
-0.949
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSAGEDT KTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSG KSCRLRWFNQ LDPRINRRPF TEEEEERLLA AHRIHGNKWA LIARLFPGRT
101: DNAVKNHWHV IMARKQREQS KLCGKRSFQD VYNDSNNTFL EKRTTPQSHH QDMLFSTRFG LENGIFFDFR SLDKNKDDSN NNNHRIVSDT PSSNSLASWN
201: FGSVPTTTTK GARDNFNNTS CSSSVYLSEC SRSSDRSFLY RIYPNPAFSL PNYKRVVPTS PLISTFLGSS DHDGRIKKDL MSFCDNNTNS SSTFTKLKAS
301: TEKDQQQTNE DETNNIKPKE VPFIDFLGVG V
101: DNAVKNHWHV IMARKQREQS KLCGKRSFQD VYNDSNNTFL EKRTTPQSHH QDMLFSTRFG LENGIFFDFR SLDKNKDDSN NNNHRIVSDT PSSNSLASWN
201: FGSVPTTTTK GARDNFNNTS CSSSVYLSEC SRSSDRSFLY RIYPNPAFSL PNYKRVVPTS PLISTFLGSS DHDGRIKKDL MSFCDNNTNS SSTFTKLKAS
301: TEKDQQQTNE DETNNIKPKE VPFIDFLGVG V
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.