Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09660 | Sorghum | nucleus | 90.97 | 91.3 |
| Zm00001d004681_P001 | Maize | nucleus | 57.76 | 83.77 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 72.56 | 73.09 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 73.29 | 73.02 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 70.4 | 70.4 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 70.04 | 70.29 |
| Os11t0207600-00 | Rice | nucleus, plastid | 58.84 | 61.05 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 36.82 | 60.71 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 48.01 | 51.95 |
| Zm00001d041818_P001 | Maize | nucleus | 38.99 | 48.0 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 42.24 | 44.49 |
| CDY71713 | Canola | nucleus | 35.74 | 43.04 |
| Zm00001d013399_P001 | Maize | nucleus | 36.82 | 42.5 |
| GSMUA_Achr10P... | Banana | nucleus | 39.35 | 41.92 |
| Zm00001d033815_P001 | Maize | nucleus | 37.18 | 41.53 |
| AT4G33450.1 | Thale cress | nucleus | 36.46 | 40.4 |
| CDY28302 | Canola | nucleus | 36.1 | 39.84 |
| CDX75353 | Canola | nucleus | 36.1 | 39.84 |
| Bra011441.1-P | Field mustard | nucleus | 35.74 | 39.76 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 37.55 | 39.69 |
| CDX68977 | Canola | nucleus | 35.74 | 39.6 |
| Bra034565.1-P | Field mustard | nucleus | 35.74 | 39.44 |
| PGSC0003DMT400063862 | Potato | nucleus | 42.24 | 38.74 |
| Solyc04g064540.2.1 | Tomato | nucleus | 42.6 | 38.19 |
| Zm00001d008251_P002 | Maize | nucleus | 40.79 | 37.79 |
| Zm00001d040426_P001 | Maize | nucleus | 37.91 | 37.77 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 40.79 | 37.42 |
| KRH53362 | Soybean | nucleus | 44.4 | 37.16 |
| KRH64569 | Soybean | nucleus | 45.13 | 36.98 |
| Zm00001d040423_P001 | Maize | nucleus | 39.71 | 36.91 |
| Zm00001d040428_P001 | Maize | nucleus | 33.94 | 33.22 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 37.18 | 26.96 |
| Zm00001d005300_P001 | Maize | nucleus | 24.19 | 23.51 |
| Zm00001d036768_P001 | Maize | nucleus | 25.27 | 22.73 |
| Zm00001d041935_P001 | Maize | nucleus | 21.66 | 22.73 |
| Zm00001d015614_P001 | Maize | nucleus | 24.91 | 22.7 |
| Zm00001d046632_P001 | Maize | nucleus | 24.91 | 22.7 |
| Zm00001d019712_P001 | Maize | nucleus | 25.27 | 20.29 |
| Zm00001d037999_P001 | Maize | nucleus | 18.05 | 17.18 |
| Zm00001d012379_P001 | Maize | nucleus | 24.55 | 16.96 |
| Zm00001d037994_P001 | Maize | nucleus | 22.02 | 16.53 |
| Zm00001d037998_P001 | Maize | nucleus | 16.97 | 14.64 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100382901 | MapMan:15.5.2.1 | ProteinID:AQK49541.1 | EMBL:BT065675 | UniProt:C0PBK6 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF496 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000194B180 | EnsemblPlantsGene:Zm00001d049079 | EnsemblPlants:Zm00001d049079_P001 | EnsemblPlants:Zm00001d049079_T001 |
| SEG:seg | : | : | : | : | : |
Description
myb domain protein 69
Coordinates
chr4:+:15079550..15081862
Molecular Weight (calculated)
30060.0 Da
IEP (calculated)
10.464
GRAVY (calculated)
-0.699
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSTTNTS DGGAKSSSCP RGHWRPGEDE KLKQLVEKYG PQNWNSIAEK LEGRSGKSCR LRWFNQLDPR INKRPFTEEE EERLLNAHRA HGNKWALIAR
101: HFPGRTDNAV KNHWHVVMAR RSRERSRLLA RAASSSSSPS TGGYLFGAVT PATSSLCFGF SKLGGAGSAS GSGGLFRSPV PAPPTSLFKN FGTATASKGL
201: LGSSFEASGR YSYSGKQPTA PLSITFSSPR EALGMDIGHH GRHEHHQKDY HASDSADEPL KKKDVPFFDF LGVGVSS
101: HFPGRTDNAV KNHWHVVMAR RSRERSRLLA RAASSSSSPS TGGYLFGAVT PATSSLCFGF SKLGGAGSAS GSGGLFRSPV PAPPTSLFKN FGTATASKGL
201: LGSSFEASGR YSYSGKQPTA PLSITFSSPR EALGMDIGHH GRHEHHQKDY HASDSADEPL KKKDVPFFDF LGVGVSS
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.