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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G105200.1 Wheat nucleus 96.03 96.73
HORVU4Hr1G017040.2 Barley nucleus 95.31 94.96
TraesCS4A01G211100.1 Wheat nucleus 94.58 94.93
Zm00001d004681_P001 Maize nucleus 53.07 76.96
Zm00001d049079_P001 Maize nucleus 70.4 70.4
EES09660 Sorghum nucleus 68.23 68.48
Os11t0207600-00 Rice nucleus, plastid 60.29 62.55
GSMUA_Achr3P16490_001 Banana nucleus 35.38 58.33
GSMUA_Achr9P08480_001 Banana nucleus 46.93 50.78
GSMUA_Achr6P17630_001 Banana nucleus 41.88 44.11
GSMUA_Achr10P... Banana nucleus 40.07 42.69
CDY71713 Canola nucleus 35.02 42.17
GSMUA_Achr3P18970_001 Banana nucleus 37.18 39.31
AT4G33450.1 Thale cress nucleus 35.38 39.2
KRH53362 Soybean nucleus 46.57 38.97
Bra011441.1-P Field mustard nucleus 34.66 38.55
CDX68977 Canola nucleus 34.66 38.4
Bra034565.1-P Field mustard nucleus 34.66 38.25
CDX75353 Canola nucleus 34.66 38.25
CDY28302 Canola nucleus 34.66 38.25
KRH64569 Soybean nucleus 46.57 38.17
PGSC0003DMT400063862 Potato nucleus 41.16 37.75
TraesCS4D01G052600.1 Wheat nucleus 33.94 37.6
Solyc04g064540.2.1 Tomato nucleus 41.52 37.22
VIT_04s0044g01380.t01 Wine grape nucleus 40.07 36.76
TraesCS3D01G191400.1 Wheat nucleus 39.71 34.27
TraesCS3D01G432300.2 Wheat nucleus 36.46 28.53
TraesCS7D01G515000.1 Wheat nucleus 25.63 23.83
TraesCS7D01G515100.1 Wheat nucleus 24.19 22.79
TraesCS6D01G162900.1 Wheat nucleus 24.19 22.56
TraesCS4D01G297900.1 Wheat nucleus 20.94 22.39
TraesCS7D01G514800.1 Wheat nucleus 25.99 20.11
TraesCS1D01G225200.1 Wheat nucleus 20.94 19.08
TraesCS5D01G164600.1 Wheat nucleus 23.47 18.95
TraesCS3D01G358400.1 Wheat nucleus 23.1 13.65
Protein Annotations
EnsemblPlants:TraesCS4D01G102100.1EnsemblPlantsGene:TraesCS4D01G102100Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/MybPANTHER:PTHR10641
PANTHER:PTHR10641:SF496PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717SUPFAM:SSF46689
TIGR:cd00167MapMan:15.5.2.1::::
Description
No Description!
Coordinates
chr4D:+:80834784..80837525
Molecular Weight (calculated)
30058.0 Da
IEP (calculated)
10.123
GRAVY (calculated)
-0.657
Length
277 amino acids
Sequence
(BLAST)
001: MAASSSTTNT SEGGAKPSSL CPRGHWRPGE DEKLRQLVEK YGPQNWNSIA EKLEGRSGKS CRLRWFNQLD PRINKRPFTE EEEERLLAAH RVHGNKWALI
101: ARHFPGRTDN AVKNHWHVVR ARRSRERCRL FAKAASSTFP SYSYSGGAQL DFAGASAGSF CFGFSNPSGG GFFGSPPAAA AVAPSSTPVM FNGYGASGNK
201: SLLSRYSSYL EGGKQPAAPS SLSIAFSSPP SREALALDGR GSPDHHRRKD YHVDGEEPLK TKDAPPFIDF LGVGVSS
Best Arabidopsis Sequence Match ( AT1G17950.1 )
(BLAST)
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.