Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71713 | Canola | nucleus | 89.64 | 97.83 |
| CDX75353 | Canola | nucleus | 86.06 | 86.06 |
| CDX68977 | Canola | nucleus | 83.67 | 84.0 |
| AT4G33450.1 | Thale cress | nucleus | 83.27 | 83.6 |
| CDY21728 | Canola | nucleus | 33.86 | 54.14 |
| CDY35992 | Canola | nucleus | 33.47 | 53.5 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 32.27 | 48.21 |
| CDX83880 | Canola | nucleus | 33.86 | 46.7 |
| Zm00001d004681_P001 | Maize | nucleus | 35.06 | 46.07 |
| CDX96475 | Canola | nucleus | 40.24 | 44.3 |
| CDX72988 | Canola | nucleus | 39.84 | 44.25 |
| CDY58312 | Canola | nucleus | 39.44 | 42.31 |
| CDX82074 | Canola | nucleus | 39.04 | 42.06 |
| Zm00001d041818_P001 | Maize | nucleus | 36.65 | 40.89 |
| CDX81853 | Canola | nucleus | 39.44 | 40.08 |
| CDX96742 | Canola | nucleus | 38.25 | 39.67 |
| CDY46114 | Canola | nucleus | 37.45 | 39.0 |
| CDX72405 | Canola | nucleus | 37.45 | 39.0 |
| CDY21727 | Canola | nucleus | 38.65 | 38.65 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 39.04 | 38.28 |
| GSMUA_Achr10P... | Banana | nucleus | 38.65 | 37.31 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 38.25 | 36.5 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 43.82 | 36.42 |
| EES09660 | Sorghum | nucleus | 39.84 | 36.23 |
| Zm00001d049079_P001 | Maize | nucleus | 39.84 | 36.1 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 37.45 | 35.88 |
| EES15780 | Sorghum | nucleus | 35.86 | 35.71 |
| Os11t0207600-00 | Rice | nucleus, plastid | 37.45 | 35.21 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 38.25 | 34.91 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 38.25 | 34.78 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 38.25 | 34.66 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 38.25 | 34.53 |
| PGSC0003DMT400063862 | Potato | nucleus | 40.64 | 33.77 |
| Solyc04g064540.2.1 | Tomato | nucleus | 39.84 | 32.36 |
| CDX83109 | Canola | nucleus | 20.72 | 32.1 |
| KRH53362 | Soybean | nucleus | 42.23 | 32.02 |
| CDY30264 | Canola | nucleus | 32.67 | 31.54 |
| CDY44415 | Canola | nucleus | 32.67 | 31.42 |
| KRH64569 | Soybean | nucleus | 41.83 | 31.07 |
| CDY67808 | Canola | nucleus | 19.12 | 30.19 |
| CDY16884 | Canola | nucleus | 37.05 | 29.81 |
| CDY67868 | Canola | nucleus | 34.66 | 29.19 |
| CDY07345 | Canola | nucleus | 34.66 | 29.19 |
| CDX78761 | Canola | nucleus | 35.86 | 28.75 |
| CDX70776 | Canola | nucleus | 35.86 | 28.75 |
| CDX85443 | Canola | nucleus | 35.06 | 28.66 |
| CDY38460 | Canola | nucleus | 36.65 | 28.4 |
| CDY02687 | Canola | nucleus | 34.66 | 28.06 |
| CDY66025 | Canola | nucleus | 31.87 | 27.78 |
| CDY69058 | Canola | nucleus | 29.08 | 27.65 |
| CDY20004 | Canola | nucleus | 31.47 | 27.53 |
| CDY40941 | Canola | nucleus | 35.06 | 27.5 |
| CDX95921 | Canola | nucleus | 35.06 | 27.5 |
| CDY50737 | Canola | nucleus | 35.86 | 26.16 |
| CDY66170 | Canola | nucleus | 32.27 | 25.8 |
| CDY44993 | Canola | nucleus | 36.26 | 25.78 |
| CDY46444 | Canola | nucleus | 36.26 | 25.78 |
| CDY12830 | Canola | nucleus | 24.3 | 24.11 |
| CDX72621 | Canola | nucleus | 24.7 | 23.4 |
| CDY01420 | Canola | nucleus | 24.3 | 23.19 |
| CDX74436 | Canola | nucleus | 32.67 | 22.71 |
| CDY30608 | Canola | nucleus | 23.9 | 22.64 |
| CDY29542 | Canola | nucleus | 23.9 | 22.64 |
| CDY23023 | Canola | nucleus | 25.5 | 22.07 |
| CDY02098 | Canola | nucleus | 25.5 | 21.84 |
| CDY22442 | Canola | nucleus | 23.9 | 21.82 |
| CDY57355 | Canola | nucleus | 23.9 | 21.58 |
| CDY38933 | Canola | nucleus | 24.7 | 21.23 |
| CDX89554 | Canola | nucleus | 24.7 | 21.16 |
| CDX75635 | Canola | nucleus | 25.1 | 21.07 |
| CDY44045 | Canola | nucleus | 23.9 | 21.05 |
| CDX69287 | Canola | nucleus | 25.5 | 20.91 |
| CDX73963 | Canola | nucleus | 24.3 | 18.21 |
| CDY07907 | Canola | nucleus | 23.9 | 18.07 |
| CDY43567 | Canola | nucleus | 15.54 | 17.97 |
| CDX68566 | Canola | nucleus | 22.31 | 17.83 |
| CDY20494 | Canola | nucleus | 23.9 | 16.3 |
| CDY27271 | Canola | nucleus | 23.51 | 15.82 |
| CDX72208 | Canola | nucleus | 22.71 | 15.49 |
| CDX74825 | Canola | nucleus | 24.3 | 15.21 |
| CDY70901 | Canola | nucleus | 13.15 | 11.54 |
| CDY70773 | Canola | nucleus | 13.15 | 11.54 |
| CDX83108 | Canola | cytosol | 0.8 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY28302 | EnsemblPlantsGene:GSBRNA2T00040053001 | Gene3D:1.10.10.60 | GO:A0A078GT24 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF525 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDY28302 | ProteinID:CDY28302.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF1999 | UniProt:A0A078GT24 | MapMan:15.5.2.1 | : |
Description
BnaC03g66570DBnaC03g66570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT24]
Coordinates
chrLK032217:-:230909..231769
Molecular Weight (calculated)
29043.9 Da
IEP (calculated)
10.067
GRAVY (calculated)
-0.935
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMSRGSNSF DNKQISCQRG HWRPIEDDHL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLQAHRFQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RESSSSTATS TFNQSWHNIL SHSSSLTRLD RSQFGLWTYQ KDKSRGLWPY TFVPAPKDGQ FGSSSISSLH KDIYPERIKS
201: KELVDHHNYE FQAATPDHKK NSISEDGPSM GDNGGKKNVT FIDFLGVGLL S
101: PGRTDNAVKN HFHVIMARRK RESSSSTATS TFNQSWHNIL SHSSSLTRLD RSQFGLWTYQ KDKSRGLWPY TFVPAPKDGQ FGSSSISSLH KDIYPERIKS
201: KELVDHHNYE FQAATPDHKK NSISEDGPSM GDNGGKKNVT FIDFLGVGLL S
001: MEMSRGSNSF DNKKPSCQRG HWRPVEDDNL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
Arabidopsis Description
ATMYB69MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.