Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025652.1-P | Field mustard | nucleus | 59.75 | 36.68 |
| CDY30264 | Canola | nucleus | 58.49 | 35.77 |
| CDY35992 | Canola | nucleus | 32.7 | 33.12 |
| CDY21728 | Canola | nucleus | 31.45 | 31.85 |
| CDX83880 | Canola | nucleus | 33.33 | 29.12 |
| AT5G39700.1 | Thale cress | nucleus | 33.96 | 28.42 |
| CDX74436 | Canola | nucleus | 60.38 | 26.59 |
| CDY20004 | Canola | nucleus | 47.8 | 26.48 |
| CDY66170 | Canola | nucleus | 50.31 | 25.48 |
| CDY66025 | Canola | nucleus | 45.91 | 25.35 |
| CDY44415 | Canola | nucleus | 37.74 | 22.99 |
| CDX72988 | Canola | nucleus | 32.08 | 22.57 |
| CDX96475 | Canola | nucleus | 32.08 | 22.37 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 35.22 | 22.22 |
| CDX82074 | Canola | nucleus | 32.08 | 21.89 |
| CDY58312 | Canola | nucleus | 32.08 | 21.79 |
| CDY69058 | Canola | nucleus | 35.85 | 21.59 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 37.11 | 21.45 |
| Os01t0274800-01 | Rice | nucleus | 35.22 | 21.13 |
| CDX96742 | Canola | nucleus | 32.08 | 21.07 |
| CDY71713 | Canola | nucleus | 30.19 | 20.87 |
| CDY21727 | Canola | nucleus | 32.7 | 20.72 |
| CDX81853 | Canola | nucleus | 32.08 | 20.65 |
| GSMUA_Achr10P... | Banana | nucleus | 38.99 | 20.39 |
| CDX85443 | Canola | nucleus | 38.36 | 19.87 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 37.74 | 19.74 |
| CDY02687 | Canola | nucleus | 38.36 | 19.68 |
| CDX68977 | Canola | nucleus | 30.82 | 19.6 |
| CDX75353 | Canola | nucleus | 30.82 | 19.52 |
| CDY16884 | Canola | nucleus | 37.74 | 19.23 |
| CDY38460 | Canola | nucleus | 38.99 | 19.14 |
| CDX83109 | Canola | nucleus | 19.5 | 19.14 |
| CDY28302 | Canola | nucleus | 30.19 | 19.12 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 35.85 | 18.87 |
| CDX72405 | Canola | nucleus | 27.67 | 18.26 |
| CDX78761 | Canola | nucleus | 35.85 | 18.21 |
| CDX70776 | Canola | nucleus | 35.85 | 18.21 |
| CDY07345 | Canola | nucleus | 33.96 | 18.12 |
| GSMUA_Achr10P... | Banana | nucleus | 36.48 | 18.07 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 38.99 | 17.92 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 35.22 | 17.89 |
| CDY46114 | Canola | nucleus | 27.04 | 17.84 |
| CDY67868 | Canola | nucleus | 33.33 | 17.79 |
| EES02760 | Sorghum | nucleus | 29.56 | 17.6 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 35.22 | 17.55 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 35.22 | 17.45 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 35.85 | 17.27 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 34.59 | 16.92 |
| CDX95921 | Canola | nucleus | 33.96 | 16.88 |
| CDY40941 | Canola | nucleus | 33.96 | 16.88 |
| CDY50737 | Canola | nucleus | 33.96 | 15.7 |
| Zm00001d040428_P001 | Maize | nucleus | 27.67 | 15.55 |
| CDY46444 | Canola | nucleus | 33.33 | 15.01 |
| CDY44993 | Canola | nucleus | 33.33 | 15.01 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 35.22 | 14.21 |
| CDY12830 | Canola | nucleus | 22.01 | 13.83 |
| CDX72621 | Canola | nucleus | 22.64 | 13.58 |
| CDY01420 | Canola | nucleus | 22.01 | 13.31 |
| CDY22442 | Canola | nucleus | 22.64 | 13.09 |
| CDY38933 | Canola | nucleus | 23.9 | 13.01 |
| CDX89554 | Canola | nucleus | 23.9 | 12.97 |
| CDY44045 | Canola | nucleus | 22.64 | 12.63 |
| CDY29542 | Canola | nucleus | 20.75 | 12.45 |
| CDY30608 | Canola | nucleus | 20.75 | 12.45 |
| CDX75635 | Canola | nucleus | 22.64 | 12.04 |
| CDY43567 | Canola | nucleus | 16.35 | 11.98 |
| CDY57355 | Canola | nucleus | 20.75 | 11.87 |
| CDX69287 | Canola | nucleus | 22.64 | 11.76 |
| CDY23023 | Canola | nucleus | 21.38 | 11.72 |
| CDY02098 | Canola | nucleus | 21.38 | 11.6 |
| CDY07907 | Canola | nucleus | 22.01 | 10.54 |
| CDX73963 | Canola | nucleus | 22.01 | 10.45 |
| CDX72208 | Canola | nucleus | 23.9 | 10.33 |
| CDX68566 | Canola | nucleus | 20.13 | 10.19 |
| CDY27271 | Canola | nucleus | 23.9 | 10.19 |
| CDY20494 | Canola | nucleus | 23.27 | 10.05 |
| CDX74825 | Canola | nucleus | 23.27 | 9.23 |
| CDY70901 | Canola | nucleus | 3.77 | 2.1 |
| CDY70773 | Canola | nucleus | 3.77 | 2.1 |
| CDX83108 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY67808 | EnsemblPlantsGene:GSBRNA2T00066880001 | Gene3D:1.10.10.60 | GO:A0A078JJX8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY67808 | ProteinID:CDY67808.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF162C | UniProt:A0A078JJX8 | MapMan:15.5.2.1 | : |
Description
BnaAnng25220DBnaAnng25220D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JJX8]
Coordinates
chrLK036530:-:3..676
Molecular Weight (calculated)
18780.9 Da
IEP (calculated)
10.730
GRAVY (calculated)
-0.927
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYVHGFKEN NLKKTRMEFP KYPCDVSHCR VPFNGLGDNN ASSLRELCNK RKMMHQENKK KQLSKVCTRG HWKPSEDFKL KELVGVFGPK KWNHIARKMQ
101: GRTGKSCRLR WFNQLDPRII KSAFSEEEEE KLLAVHRTFG NNQFLTQSQG RDRLLLQMK
101: GRTGKSCRLR WFNQLDPRII KSAFSEEEEE KLLAVHRTFG NNQFLTQSQG RDRLLLQMK
001: MDFSCFQEYP FEFHCRGTTF NGFRENNAVS ETVEEFCNKR RMQKKSDDLK TKKKKKQSVS RVCSRGHWRI SEDTQLMELV SVYGPQNWNH IAESMQGRTG
101: KSCRLRWFNQ LDPRINKRAF SDEEEERLLA AHRAFGNKWA MIAKLFNGRT DNALKNHWHV LMARKMRQQS SSYVQRFNGS AHESNTDHKI FNLSPGLSLL
201: TLHICIEFNS VIVMRYFRYL SLRNNELMVW SQK
101: KSCRLRWFNQ LDPRINKRAF SDEEEERLLA AHRAFGNKWA MIAKLFNGRT DNALKNHWHV LMARKMRQQS SSYVQRFNGS AHESNTDHKI FNLSPGLSLL
201: TLHICIEFNS VIVMRYFRYL SLRNNELMVW SQK
Arabidopsis Description
MYB110Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.