Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005006.1-P | Field mustard | nucleus | 97.51 | 98.24 |
| CDY20494 | Canola | nucleus | 81.55 | 88.86 |
| CDX72208 | Canola | nucleus | 45.89 | 50.0 |
| CDY27271 | Canola | nucleus | 45.89 | 49.33 |
| AT2G39880.1 | Thale cress | nucleus | 39.65 | 43.32 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 33.42 | 41.61 |
| VIT_13s0019g03200.t01 | Wine grape | nucleus | 39.15 | 41.53 |
| CDX83109 | Canola | nucleus | 16.21 | 40.12 |
| Solyc05g052850.2.1 | Tomato | nucleus | 37.41 | 40.11 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 22.44 | 40.0 |
| PGSC0003DMT400069921 | Potato | nucleus | 37.16 | 39.84 |
| KRH15016 | Soybean | nucleus | 37.16 | 37.91 |
| CDX73963 | Canola | nucleus | 31.67 | 37.91 |
| CDY07907 | Canola | nucleus | 30.67 | 37.05 |
| CDY35992 | Canola | nucleus | 14.21 | 36.31 |
| CDY21728 | Canola | nucleus | 13.72 | 35.03 |
| CDY12830 | Canola | nucleus | 20.95 | 33.2 |
| KRH73115 | Soybean | nucleus | 32.42 | 32.58 |
| CDX83880 | Canola | nucleus | 14.71 | 32.42 |
| CDY01420 | Canola | nucleus | 21.2 | 32.32 |
| CDY22442 | Canola | nucleus | 21.95 | 32.0 |
| CDX75635 | Canola | nucleus | 23.44 | 31.44 |
| CDY44045 | Canola | nucleus | 22.19 | 31.23 |
| OQU87862 | Sorghum | nucleus | 30.67 | 30.83 |
| CDY38933 | Canola | nucleus | 22.44 | 30.82 |
| CDX69287 | Canola | nucleus | 23.44 | 30.72 |
| CDY29542 | Canola | nucleus | 20.2 | 30.57 |
| CDX72621 | Canola | nucleus | 20.2 | 30.57 |
| CDX89554 | Canola | nucleus | 22.19 | 30.38 |
| Os01t0850400-01 | Rice | nucleus | 30.92 | 30.02 |
| Zm00001d012379_P001 | Maize | nucleus | 29.93 | 29.93 |
| CDY57355 | Canola | nucleus | 20.7 | 29.86 |
| CDY23023 | Canola | nucleus | 21.45 | 29.66 |
| CDY02098 | Canola | nucleus | 21.45 | 29.35 |
| CDY30608 | Canola | nucleus | 19.2 | 29.06 |
| CDY70773 | Canola | nucleus | 20.7 | 29.02 |
| CDY70901 | Canola | nucleus | 20.7 | 29.02 |
| CDX82074 | Canola | nucleus | 15.96 | 27.47 |
| CDX72988 | Canola | nucleus | 15.46 | 27.43 |
| CDY58312 | Canola | nucleus | 15.96 | 27.35 |
| CDX96475 | Canola | nucleus | 15.46 | 27.19 |
| CDY43567 | Canola | nucleus | 14.71 | 27.19 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 30.67 | 26.62 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 30.92 | 26.5 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 26.18 | 26.45 |
| CDX96742 | Canola | nucleus | 15.96 | 26.45 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 30.92 | 26.44 |
| HORVU3Hr1G085570.1 | Barley | plastid | 29.93 | 26.03 |
| CDX72405 | Canola | nucleus | 15.46 | 25.73 |
| CDY46114 | Canola | nucleus | 15.46 | 25.73 |
| CDY71713 | Canola | nucleus | 14.71 | 25.65 |
| CDX81853 | Canola | nucleus | 15.46 | 25.1 |
| CDY21727 | Canola | nucleus | 15.71 | 25.1 |
| CDY30264 | Canola | nucleus | 16.21 | 25.0 |
| CDX68977 | Canola | nucleus | 15.46 | 24.8 |
| CDX75353 | Canola | nucleus | 15.46 | 24.7 |
| CDX68566 | Canola | nucleus | 19.2 | 24.52 |
| CDY28302 | Canola | nucleus | 15.21 | 24.3 |
| CDY44415 | Canola | nucleus | 15.71 | 24.14 |
| CDY40941 | Canola | nucleus | 19.2 | 24.06 |
| CDY67868 | Canola | nucleus | 17.46 | 23.49 |
| CDY07345 | Canola | nucleus | 17.46 | 23.49 |
| CDY67808 | Canola | nucleus | 9.23 | 23.27 |
| CDX95921 | Canola | nucleus | 18.45 | 23.12 |
| CDX78761 | Canola | nucleus | 17.46 | 22.36 |
| CDX70776 | Canola | nucleus | 17.46 | 22.36 |
| CDY20004 | Canola | nucleus | 15.96 | 22.3 |
| CDY66025 | Canola | nucleus | 15.96 | 22.22 |
| CDY69058 | Canola | nucleus | 14.46 | 21.97 |
| CDY16884 | Canola | nucleus | 16.96 | 21.79 |
| CDY02687 | Canola | nucleus | 16.71 | 21.61 |
| CDY38460 | Canola | nucleus | 17.46 | 21.6 |
| CDY44993 | Canola | nucleus | 18.95 | 21.53 |
| CDX85443 | Canola | nucleus | 16.46 | 21.5 |
| CDY50737 | Canola | nucleus | 18.2 | 21.22 |
| CDY46444 | Canola | nucleus | 18.45 | 20.96 |
| CDY66170 | Canola | nucleus | 15.46 | 19.75 |
| CDX74436 | Canola | nucleus | 16.21 | 18.01 |
| CDX83108 | Canola | cytosol | 0.75 | 7.69 |
Protein Annotations
| EnsemblPlants:CDX74825 | EnsemblPlantsGene:GSBRNA2T00116801001 | Gene3D:1.10.10.60 | GO:A0A078CD89 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX74825 | ProteinID:CDX74825.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE6B58 | MapMan:15.5.2.1 | : |
Description
BnaA05g05710D
Coordinates
chrLK031802:+:834178..835727
Molecular Weight (calculated)
44342.2 Da
IEP (calculated)
7.762
GRAVY (calculated)
-0.535
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSEIVNQTP PETPSTPFYD SSEDAINAAV DFELAAVREV GGDSNGSNGG GGRSKAKGPW STEQDAVLTR LVNKLGPRNW TLIARGIPGR SGKSCRLRWC
101: NQLDPCLKRK PFTDEEENLL MSAHAVHGNK WSVIAKLLPG RTDNAIKNHW NSALKRKHAD LWNNHHNSIS NTVNASSSRK EETNHHPPLV SSTDVKMEDV
201: ASKPREGKPG VYRPVARLGA FSVYRPGYMN QRVTPCEGPL VQAARPGSLG GQFLQSLCYQ PNVPSRCGHG CCNQQPEKRL SSSSVLGLEF VDYEETSSVG
301: LDQELVSIAT DLNNIAWIRS GLNNSYAREV GQRLNADSRF HFEHARARGK FTGMVNNVLV LYFDDKVRDF DVPFQTFESV LLAIELGFYM GEKEEPVVLT
401: C
101: NQLDPCLKRK PFTDEEENLL MSAHAVHGNK WSVIAKLLPG RTDNAIKNHW NSALKRKHAD LWNNHHNSIS NTVNASSSRK EETNHHPPLV SSTDVKMEDV
201: ASKPREGKPG VYRPVARLGA FSVYRPGYMN QRVTPCEGPL VQAARPGSLG GQFLQSLCYQ PNVPSRCGHG CCNQQPEKRL SSSSVLGLEF VDYEETSSVG
301: LDQELVSIAT DLNNIAWIRS GLNNSYAREV GQRLNADSRF HFEHARARGK FTGMVNNVLV LYFDDKVRDF DVPFQTFESV LLAIELGFYM GEKEEPVVLT
401: C
001: MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
Arabidopsis Description
MYB109MYB transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LDW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.