Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007186.1-P | Field mustard | nucleus | 98.39 | 98.92 |
| CDX72208 | Canola | nucleus | 96.25 | 97.55 |
| AT3G55730.1 | Thale cress | nucleus | 78.82 | 73.68 |
| CDY20494 | Canola | nucleus | 48.53 | 49.18 |
| CDX74825 | Canola | nucleus | 49.33 | 45.89 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 25.74 | 42.67 |
| VIT_13s0019g03200.t01 | Wine grape | nucleus | 43.16 | 42.59 |
| PGSC0003DMT400069921 | Potato | nucleus | 42.36 | 42.25 |
| Solyc05g052850.2.1 | Tomato | nucleus | 42.09 | 41.98 |
| CDX83109 | Canola | nucleus | 18.23 | 41.98 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 35.92 | 41.61 |
| KRH15016 | Soybean | nucleus | 40.75 | 38.68 |
| CDY07907 | Canola | nucleus | 34.05 | 38.25 |
| CDX73963 | Canola | nucleus | 33.78 | 37.61 |
| CDY35992 | Canola | nucleus | 15.01 | 35.67 |
| CDY21728 | Canola | nucleus | 14.48 | 34.39 |
| CDY12830 | Canola | nucleus | 23.32 | 34.39 |
| KRH73115 | Soybean | nucleus | 36.73 | 34.34 |
| CDY01420 | Canola | nucleus | 23.59 | 33.46 |
| OQU87862 | Sorghum | nucleus | 35.66 | 33.33 |
| Zm00001d012379_P001 | Maize | nucleus | 35.66 | 33.17 |
| CDY22442 | Canola | nucleus | 24.13 | 32.73 |
| Os01t0850400-01 | Rice | nucleus | 36.19 | 32.69 |
| CDY44045 | Canola | nucleus | 24.4 | 31.93 |
| CDY30608 | Canola | nucleus | 22.52 | 31.7 |
| CDX72621 | Canola | nucleus | 22.52 | 31.7 |
| CDY57355 | Canola | nucleus | 23.59 | 31.65 |
| CDY38933 | Canola | nucleus | 24.66 | 31.51 |
| CDX75635 | Canola | nucleus | 25.2 | 31.44 |
| CDY29542 | Canola | nucleus | 22.25 | 31.32 |
| CDX83880 | Canola | nucleus | 15.28 | 31.32 |
| CDY23023 | Canola | nucleus | 24.13 | 31.03 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 38.07 | 30.74 |
| CDX69287 | Canola | nucleus | 25.2 | 30.72 |
| CDX89554 | Canola | nucleus | 24.13 | 30.72 |
| CDY02098 | Canola | nucleus | 23.86 | 30.38 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 37.8 | 30.13 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 37.8 | 30.06 |
| HORVU3Hr1G085570.1 | Barley | plastid | 36.73 | 29.72 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 30.56 | 28.72 |
| CDY70901 | Canola | nucleus | 21.98 | 28.67 |
| CDY70773 | Canola | nucleus | 21.98 | 28.67 |
| CDX72988 | Canola | nucleus | 16.35 | 26.99 |
| CDY58312 | Canola | nucleus | 16.89 | 26.92 |
| CDX96475 | Canola | nucleus | 16.35 | 26.75 |
| CDX82074 | Canola | nucleus | 16.62 | 26.61 |
| CDY43567 | Canola | nucleus | 15.01 | 25.81 |
| CDY71713 | Canola | nucleus | 15.82 | 25.65 |
| CDX68566 | Canola | nucleus | 21.45 | 25.48 |
| CDY30264 | Canola | nucleus | 17.69 | 25.38 |
| CDX96742 | Canola | nucleus | 16.35 | 25.21 |
| CDY44415 | Canola | nucleus | 17.43 | 24.9 |
| CDY46114 | Canola | nucleus | 16.09 | 24.9 |
| CDX72405 | Canola | nucleus | 16.09 | 24.9 |
| CDX68977 | Canola | nucleus | 16.35 | 24.4 |
| CDX75353 | Canola | nucleus | 16.35 | 24.3 |
| CDY67868 | Canola | nucleus | 19.3 | 24.16 |
| CDY21727 | Canola | nucleus | 16.09 | 23.9 |
| CDY67808 | Canola | nucleus | 10.19 | 23.9 |
| CDX81853 | Canola | nucleus | 15.82 | 23.89 |
| CDY07345 | Canola | nucleus | 19.03 | 23.83 |
| CDY20004 | Canola | nucleus | 18.23 | 23.69 |
| CDY66025 | Canola | nucleus | 18.23 | 23.61 |
| CDY28302 | Canola | nucleus | 15.82 | 23.51 |
| CDY40941 | Canola | nucleus | 19.03 | 22.19 |
| CDY69058 | Canola | nucleus | 15.55 | 21.97 |
| CDX95921 | Canola | nucleus | 18.5 | 21.56 |
| CDY50737 | Canola | nucleus | 19.57 | 21.22 |
| CDX85443 | Canola | nucleus | 17.43 | 21.17 |
| CDY66170 | Canola | nucleus | 17.69 | 21.02 |
| CDY02687 | Canola | nucleus | 17.43 | 20.97 |
| CDY46444 | Canola | nucleus | 19.57 | 20.68 |
| CDX70776 | Canola | nucleus | 17.16 | 20.45 |
| CDX78761 | Canola | nucleus | 17.16 | 20.45 |
| CDY44993 | Canola | nucleus | 19.3 | 20.4 |
| CDY16884 | Canola | nucleus | 16.62 | 19.87 |
| CDY38460 | Canola | nucleus | 17.16 | 19.75 |
| CDX74436 | Canola | nucleus | 17.69 | 18.28 |
| CDX83108 | Canola | cytosol | 0.54 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY27271 | EnsemblPlantsGene:GSBRNA2T00037152001 | Gene3D:1.10.10.60 | GO:A0A078GPL8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY27271 | ProteinID:CDY27271.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE9D46 | UniProt:A0A078GPL8 | MapMan:15.5.2.1 | : |
Description
BnaA09g35310DBnaA09g35310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPL8]
Coordinates
chrLK032201:+:533951..535693
Molecular Weight (calculated)
41344.7 Da
IEP (calculated)
5.468
GRAVY (calculated)
-0.527
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSEPLPFP SSADSDEVTT AAAELAAGDS SGGGYEIIKS KVKGPWSTEE DAVLTKLVSK LGPRNWSLIA RGIPGRSGKS CRLRWCNQLD PCLKRKPFSD
101: EEDHMIISAH AIHGNKWAVI AKLLPGRTDN AIKNHWNSTL RRKYADLWKN SNQVTTAYIK NENVEQQLPQ EEIVSPPEVP QVVDVTMYDE PTQVLDDVTM
201: DDASPNEPQE QAPPIESSIP VFRPVARAGA FRVYNPTSQR NGYRDHNVVP CEGPLIQAAK PDSLAGKFLQ SLCGEPNIPS KCGHGCSTHP TEYGKSVLGA
301: EFVDYEEPCP VFNQELISIA TDLNNIAWIK SGLDNAIVRE AEQNLKMDQI TFSDPRIRFS GMMPRQHFFC ARS
101: EEDHMIISAH AIHGNKWAVI AKLLPGRTDN AIKNHWNSTL RRKYADLWKN SNQVTTAYIK NENVEQQLPQ EEIVSPPEVP QVVDVTMYDE PTQVLDDVTM
201: DDASPNEPQE QAPPIESSIP VFRPVARAGA FRVYNPTSQR NGYRDHNVVP CEGPLIQAAK PDSLAGKFLQ SLCGEPNIPS KCGHGCSTHP TEYGKSVLGA
301: EFVDYEEPCP VFNQELISIA TDLNNIAWIK SGLDNAIVRE AEQNLKMDQI TFSDPRIRFS GMMPRQHFFC ARS
001: MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
Arabidopsis Description
MYB109MYB transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LDW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.