Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29542 | Canola | nucleus | 94.34 | 94.34 |
| CDY44045 | Canola | nucleus | 78.49 | 72.98 |
| CDX75635 | Canola | nucleus | 81.51 | 72.24 |
| CDY22442 | Canola | nucleus | 73.96 | 71.27 |
| CDX69287 | Canola | nucleus | 78.87 | 68.3 |
| CDY38933 | Canola | nucleus | 68.68 | 62.33 |
| CDX89554 | Canola | nucleus | 67.17 | 60.75 |
| CDX83109 | Canola | nucleus | 33.58 | 54.94 |
| CDY12830 | Canola | nucleus | 49.06 | 51.38 |
| CDY30608 | Canola | nucleus | 51.32 | 51.32 |
| CDY01420 | Canola | nucleus | 50.57 | 50.95 |
| CDY57355 | Canola | nucleus | 52.08 | 49.64 |
| KRH28419 | Soybean | nucleus | 53.58 | 47.81 |
| KRH57983 | Soybean | nucleus | 52.45 | 47.12 |
| CDY23023 | Canola | nucleus | 51.32 | 46.9 |
| KRH77058 | Soybean | nucleus | 53.96 | 46.89 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 54.72 | 46.47 |
| CDY43567 | Canola | nucleus | 37.74 | 46.08 |
| CDY02098 | Canola | nucleus | 50.57 | 45.73 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 53.58 | 45.37 |
| PGSC0003DMT400008569 | Potato | nucleus | 49.81 | 41.25 |
| Zm00001d005300_P001 | Maize | nucleus | 44.15 | 41.05 |
| Solyc04g078420.1.1 | Tomato | nucleus | 49.81 | 40.24 |
| Os09t0106700-01 | Rice | nucleus | 47.17 | 39.19 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 49.43 | 39.1 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 49.06 | 38.69 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 49.06 | 37.9 |
| Zm00001d019712_P001 | Maize | nucleus | 48.3 | 37.1 |
| CDX68566 | Canola | nucleus | 43.02 | 36.31 |
| CDX83108 | Canola | cytosol | 5.28 | 35.9 |
| EER98550 | Sorghum | nucleus | 48.68 | 35.25 |
| CDY21728 | Canola | nucleus | 19.62 | 33.12 |
| CDY35992 | Canola | nucleus | 19.25 | 32.48 |
| HORVU5Hr1G049880.1 | Barley | plastid | 49.06 | 30.66 |
| CDX83880 | Canola | nucleus | 19.62 | 28.57 |
| CDX72988 | Canola | nucleus | 22.26 | 26.11 |
| CDY71713 | Canola | nucleus | 22.64 | 26.09 |
| CDX96475 | Canola | nucleus | 22.26 | 25.88 |
| CDY07907 | Canola | nucleus | 31.32 | 25.0 |
| CDX72405 | Canola | nucleus | 22.64 | 24.9 |
| CDX82074 | Canola | nucleus | 21.89 | 24.89 |
| CDX68977 | Canola | nucleus | 23.4 | 24.8 |
| CDY58312 | Canola | nucleus | 21.89 | 24.79 |
| CDX73963 | Canola | nucleus | 31.32 | 24.78 |
| CDX75353 | Canola | nucleus | 23.4 | 24.7 |
| CDY28302 | Canola | nucleus | 23.4 | 24.7 |
| CDY46114 | Canola | nucleus | 22.26 | 24.48 |
| CDY44415 | Canola | nucleus | 23.02 | 23.37 |
| CDX81853 | Canola | nucleus | 21.51 | 23.08 |
| CDY30264 | Canola | nucleus | 22.26 | 22.69 |
| CDY67808 | Canola | nucleus | 13.58 | 22.64 |
| CDX72208 | Canola | nucleus | 31.32 | 22.55 |
| CDY27271 | Canola | nucleus | 31.7 | 22.52 |
| CDY21727 | Canola | nucleus | 21.13 | 22.31 |
| CDY20494 | Canola | nucleus | 30.94 | 22.28 |
| CDX96742 | Canola | nucleus | 20.0 | 21.9 |
| CDY69058 | Canola | nucleus | 21.51 | 21.59 |
| CDY16884 | Canola | nucleus | 25.28 | 21.47 |
| CDY20004 | Canola | nucleus | 23.02 | 21.25 |
| CDY66025 | Canola | nucleus | 23.02 | 21.18 |
| CDY07345 | Canola | nucleus | 23.77 | 21.14 |
| CDX70776 | Canola | nucleus | 24.91 | 21.09 |
| CDX78761 | Canola | nucleus | 24.91 | 21.09 |
| CDX85443 | Canola | nucleus | 24.15 | 20.85 |
| CDY67868 | Canola | nucleus | 23.4 | 20.81 |
| CDY38460 | Canola | nucleus | 25.28 | 20.68 |
| CDY02687 | Canola | nucleus | 24.15 | 20.65 |
| CDX74825 | Canola | nucleus | 30.57 | 20.2 |
| CDX95921 | Canola | nucleus | 24.15 | 20.0 |
| CDY40941 | Canola | nucleus | 23.77 | 19.69 |
| CDY66170 | Canola | nucleus | 22.64 | 19.11 |
| CDY70773 | Canola | nucleus | 18.87 | 17.48 |
| CDY50737 | Canola | nucleus | 22.64 | 17.44 |
| CDY44993 | Canola | nucleus | 23.02 | 17.28 |
| CDY46444 | Canola | nucleus | 23.02 | 17.28 |
| CDY70901 | Canola | nucleus | 18.49 | 17.13 |
| CDX74436 | Canola | nucleus | 21.89 | 16.07 |
Protein Annotations
| EnsemblPlants:CDX72621 | EnsemblPlantsGene:GSBRNA2T00100169001 | Gene3D:1.10.10.60 | GO:A0A078C6D9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX72621 | ProteinID:CDX72621.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEA1BB | MapMan:15.5.2.1 | : | : |
Description
BnaC07g46430D
Coordinates
chrLK031796:+:2238394..2239270
Molecular Weight (calculated)
29043.3 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.662
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPTRKNME RIKGPWSPEE DDLLQKLVEK HGPKNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFSP EEDEMIVRAH ARYGNKWATV SRLLSGRTDN
101: AVKNHWNSTL KRKCTPEGHD GNLGEEQPSK RAASGGVCTG LYMSPGSPAG SDVSASDGGD PPTYLSLSLP WNNGCDTETV GINGDTVIDG GYTAELFPVR
201: KEEERGIVGG EFMTAVQEMV RTEVRSYMAE LQRGNVGGGL CIPQSVNSCR VGFREFIVNQ IGKME
101: AVKNHWNSTL KRKCTPEGHD GNLGEEQPSK RAASGGVCTG LYMSPGSPAG SDVSASDGGD PPTYLSLSLP WNNGCDTETV GINGDTVIDG GYTAELFPVR
201: KEEERGIVGG EFMTAVQEMV RTEVRSYMAE LQRGNVGGGL CIPQSVNSCR VGFREFIVNQ IGKME
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.